| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_4190 |
|---|
| Symbol | |
|---|
| ID | 5844403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 4188526 |
|---|
| End bp | 4189239 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641379302 |
|---|
| Product | sporulation sigma factor SigK |
|---|
| Protein accession | YP_001646979 |
|---|
| Protein GI | 163942095 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
|---|
| TIGRFAM ID | [TIGR02846] RNA polymerase sigma-K factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTCTAT TCGCCGCAAT TGGATATATG GTTCGAGAAG TGTTTGTATT TGTTTCTTAT
GTGAAGAACA ATGCGTTCCC GCAGCCGTTA TCATCAGATG ATGAGAGAAA GTACTTAGAG
TTAATGGAGC AAGGTGATGC TCAAGCGAGA AATCTTTTAA TTGAACATAA TTTACGGCTT
GTAGCTCATA TTGTTAAGAA ATTCGAAAAC ACTGGTGAAG ATGCAGAAGA TTTAATTTCA
ATTGGTACCA TTGGGCTTAT TAAAGCGATT GAAAGCTATT CAGCAGGGAA AGGAACTAAG
CTTGCAACAT ATGCAGCACG CTGTATCGAA AATGAAATTT TGATGCATTT ACGTGTGCTA
AAGAAAACGA AAAAAGACGT TTCACTTCAT GATCCGATTG GGCAAGATAA AGAGGGTAAT
GAAATATCAC TTATTGATAT ATTAAAATCA GAATCTGAAG ATGTAATTGA TATGATTCAG
CTTAGTATGG AGTTAGAAAA AATTAAAGAG TATATCGATA TTTTGGACGA ACGAGAGAAA
GAAGTAATTG TGAAGCGTTT TGGACTTGGG CTTGATAAAG AGAAAACACA GAGGGAGATT
GCGAAGGCAC TCGGTATTTC AAGAAGCTAC GTATCGCGAA TTGAAAAGCG TGCTTTAATG
AAAATGTTCC ATGAATTTGT GCGGGCTGAG AAAGAGAAAA AAGCAAAAGA ATAA
|
|---|
| Protein sequence | MSLFAAIGYM VREVFVFVSY VKNNAFPQPL SSDDERKYLE LMEQGDAQAR NLLIEHNLRL
VAHIVKKFEN TGEDAEDLIS IGTIGLIKAI ESYSAGKGTK LATYAARCIE NEILMHLRVL
KKTKKDVSLH DPIGQDKEGN EISLIDILKS ESEDVIDMIQ LSMELEKIKE YIDILDEREK
EVIVKRFGLG LDKEKTQREI AKALGISRSY VSRIEKRALM KMFHEFVRAE KEKKAKE
|
|---|
| |