| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_4174 |
|---|
| Symbol | holA |
|---|
| ID | 5844387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 4175600 |
|---|
| End bp | 4176610 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641379286 |
|---|
| Product | DNA polymerase III subunit delta |
|---|
| Protein accession | YP_001646963 |
|---|
| Protein GI | 163942079 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0277234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATA TACATAAGAA GATTAAAAAG AAACAGTTCG CTCCGTTGTA TGTACTGTAT
GGAACGGAAG CTTATTTTAT AAATGAAACG ATAAAGCTTA TTACAACGGA AGCGCTTGAA
GAGGAAGATC GAGAGTTTAA TGTTGTGACA TACGATTTGG AAGAAGCGTA TTTAGAAGAT
GTAGTTGAGG ATGCGCATAC GCTTCCTTTT TTTGGAGAGC GTAAAGTTAT ATTAATAAAA
TCACCACTAT TTTTAACGGC ACAAAAAGAA AAATTAGAAC AAAATATAAA AATTTTAGAA
GAATATATTG GGGAGCCATC TCCTTTTTCT ATTCTTGTTT TTGTTGCGCC TTATGAAAAA
TTAGACGAAC GAAAAAAAAT TACAAAACTA TTAAAGAAAA CAGCGGATGT AATAGAAGCA
AATGCGATGC AAGTGCAGGA TGTTCAGAAG TGGATTGTTT CTCGTGCGGA TGAGGTGCAT
GTGCATATTG ATAATGCAGC TGTTAGTTTA TTGTTAGAGC TTGTGGGAAG CAATGTAACA
ATGTTGGCGA AGGAAATGGA CAAGTTAACG TTATACGTCG GTATGGGCGG AGAAATTACG
CCAAAACTTG TCACGGAACT TGTGCCGAAA TCTGTTGAGC AAAACGTGTT TGCTTTAACA
GAAAAAGTGG TGAAAAAAGA TATCGCTGGT GCGATGCAAA TTTTAGACGG ATTATTTACA
CAGCAGGAAG AACCGATTAA ACTGCTCGCT TTATTAGTAA GTCAGTTCCG CTTGCTGCAT
CAAGTGAAAG AGTTGCAACA GCGTGGTTAC GGACAAAATC AAATCGCGTC CCATATTGGT
GTACATCCGT ACCGGGTAAA GTTGGCGATG AATCAAACGA AGTTTTTCTC TTTTGAAGAA
TTAAAAAAAG TTATTATAGA ATTGGCGGAA GCTGATTATA GTATGAAGAC TGGAAAGATG
GATAAGAAAC TTGTGCTTGA GTTTTTCTTA ATGCGGTTAA ATCATATGTA G
|
|---|
| Protein sequence | MSDIHKKIKK KQFAPLYVLY GTEAYFINET IKLITTEALE EEDREFNVVT YDLEEAYLED
VVEDAHTLPF FGERKVILIK SPLFLTAQKE KLEQNIKILE EYIGEPSPFS ILVFVAPYEK
LDERKKITKL LKKTADVIEA NAMQVQDVQK WIVSRADEVH VHIDNAAVSL LLELVGSNVT
MLAKEMDKLT LYVGMGGEIT PKLVTELVPK SVEQNVFALT EKVVKKDIAG AMQILDGLFT
QQEEPIKLLA LLVSQFRLLH QVKELQQRGY GQNQIASHIG VHPYRVKLAM NQTKFFSFEE
LKKVIIELAE ADYSMKTGKM DKKLVLEFFL MRLNHM
|
|---|
| |