Gene BcerKBAB4_3903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_3903 
Symbol 
ID5844115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp3940919 
End bp3941677 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content38% 
IMG OID641379021 
Productsporulation sigma factor SigF 
Protein accessionYP_001646699 
Protein GI163941815 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02885] RNA polymerase sigma-F factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.715722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATAG AGGTCAGAAA TGAGAAGAAG AAACCTCAGT TAAAGGACCA CGAGCTAAAA 
GCGTTAATTC AAAAAAGTCA AGATGGAGAT CAACAAGCGA GAGATACAAT CGTTCAAAGT
AATATGCGTC TCGTATGGTC GGTTGTACAG CGATTTCTTA ATCGAGGATA CGAACCAGAC
GATTTATTTC AAATTGGATG TATTGGACTC TTAAAATCGG TAGATAAATT TGATTTATCT
TTCGACGTGA AATTTTCAAC ATATGCAGTT CCAATGATTA TCGGTGAAAT ACAACGATTT
TTACGTGACG ATGGATCAGT GAAAGTAAGT AGATCTTTAA AAGAAACAGG AAACAAAGTC
CGAAAGATGA GAGACGAGCT TTCGAAAGAA TTTGGAAGGG CTCCAACGAT TAATGAGGTA
GCACAGGCTC TTGAACTAAC GCCGGAAGAA GTTGTTCTGG CGCAAGAAGC GAGTCGTGCT
CCTTCGTCGA TACATGAAAC CGTGTATGAA AACGACGGAG ATCCAATTAC TATTTTAGAT
CAAATTGCAG ATCAATCGGA AACGAAATGG TTTGATAAAA TTGCTTTAAA AGAAGCAATT
AGAGAATTGG ATGAACGAGA AAGGCTAATT GTGTATTTGC GCTATTATAA AGACCAAACC
CAATCAGAAG TAGCGGAGCG CATAGGCATT TCGCAAGTAC AAGTTTCAAG ACTTGAAAAG
AAAATATTAA AACAGATGAA AGATCGAATA GATGAATAG
 
Protein sequence
MDIEVRNEKK KPQLKDHELK ALIQKSQDGD QQARDTIVQS NMRLVWSVVQ RFLNRGYEPD 
DLFQIGCIGL LKSVDKFDLS FDVKFSTYAV PMIIGEIQRF LRDDGSVKVS RSLKETGNKV
RKMRDELSKE FGRAPTINEV AQALELTPEE VVLAQEASRA PSSIHETVYE NDGDPITILD
QIADQSETKW FDKIALKEAI RELDERERLI VYLRYYKDQT QSEVAERIGI SQVQVSRLEK
KILKQMKDRI DE