Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_3903 |
Symbol | |
ID | 5844115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 3940919 |
End bp | 3941677 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641379021 |
Product | sporulation sigma factor SigF |
Protein accession | YP_001646699 |
Protein GI | 163941815 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02885] RNA polymerase sigma-F factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.715722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATAG AGGTCAGAAA TGAGAAGAAG AAACCTCAGT TAAAGGACCA CGAGCTAAAA GCGTTAATTC AAAAAAGTCA AGATGGAGAT CAACAAGCGA GAGATACAAT CGTTCAAAGT AATATGCGTC TCGTATGGTC GGTTGTACAG CGATTTCTTA ATCGAGGATA CGAACCAGAC GATTTATTTC AAATTGGATG TATTGGACTC TTAAAATCGG TAGATAAATT TGATTTATCT TTCGACGTGA AATTTTCAAC ATATGCAGTT CCAATGATTA TCGGTGAAAT ACAACGATTT TTACGTGACG ATGGATCAGT GAAAGTAAGT AGATCTTTAA AAGAAACAGG AAACAAAGTC CGAAAGATGA GAGACGAGCT TTCGAAAGAA TTTGGAAGGG CTCCAACGAT TAATGAGGTA GCACAGGCTC TTGAACTAAC GCCGGAAGAA GTTGTTCTGG CGCAAGAAGC GAGTCGTGCT CCTTCGTCGA TACATGAAAC CGTGTATGAA AACGACGGAG ATCCAATTAC TATTTTAGAT CAAATTGCAG ATCAATCGGA AACGAAATGG TTTGATAAAA TTGCTTTAAA AGAAGCAATT AGAGAATTGG ATGAACGAGA AAGGCTAATT GTGTATTTGC GCTATTATAA AGACCAAACC CAATCAGAAG TAGCGGAGCG CATAGGCATT TCGCAAGTAC AAGTTTCAAG ACTTGAAAAG AAAATATTAA AACAGATGAA AGATCGAATA GATGAATAG
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Protein sequence | MDIEVRNEKK KPQLKDHELK ALIQKSQDGD QQARDTIVQS NMRLVWSVVQ RFLNRGYEPD DLFQIGCIGL LKSVDKFDLS FDVKFSTYAV PMIIGEIQRF LRDDGSVKVS RSLKETGNKV RKMRDELSKE FGRAPTINEV AQALELTPEE VVLAQEASRA PSSIHETVYE NDGDPITILD QIADQSETKW FDKIALKEAI RELDERERLI VYLRYYKDQT QSEVAERIGI SQVQVSRLEK KILKQMKDRI DE
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