Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_3731 |
Symbol | |
ID | 5843943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 3781735 |
End bp | 3782454 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641378850 |
Product | sporulation sigma factor SigE |
Protein accession | YP_001646528 |
Protein GI | 163941644 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000278458 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGAAAT TTAAATTTTA TTTGGTATAC CTTTGGTATA AAGTATTGCT GAAATTAGGA ATTAAGACCG ATGAAATTTA TTATATTGGT GGAAGTGAAG CGTTGCCACC GCCGTTAACG AAAGAAGAAG AGGCAGTTCT TTTGAATAAA TTACCAAATG GAGATCAAGC TGCGAGGTCG ATGCTTATTG AACGTAACCT AAGGCTTGTT GTATATATAG CAAGAAAATT TGAAAATACA GGGATCAATA TTGAGGATTT GATTAGTATA GGAACAATTG GTCTTATTAA GGCAGTGAAT ACATTTAATC CAGAAAAGAA AATTAAATTA GCAACATATG CATCTCGTTG TATAGAAAAT GAAATTTTAA TGCATTTGCG TCGAAATAAT AAAAATCGTT CGGAAGTTTC TTTTGATGAA CCGCTTAACA TTGATTGGGA CGGAAATGAA CTGTTACTAT CAGATGTTTT AGGTACAGAT GATGACATTA TTACAAAAGA TTTAGAAGCT ACTGTAGATC GTCATCTTTT AATGAAAGCA TTGCATCAAT TAAATGACCG TGAAAAACAA ATTATGGAGC TTCGGTTTGG ACTCGCTGGT GGCGAAGAGA AGACACAAAA AGATGTGGCT GATATGCTTG GAATTTCACA GTCTTATATT TCTCGTTTGG AAAAAAGAAT TATAAAAAGA TTACGAAAAG AATTTAATAA AATGGTGTGA
|
Protein sequence | MVKFKFYLVY LWYKVLLKLG IKTDEIYYIG GSEALPPPLT KEEEAVLLNK LPNGDQAARS MLIERNLRLV VYIARKFENT GINIEDLISI GTIGLIKAVN TFNPEKKIKL ATYASRCIEN EILMHLRRNN KNRSEVSFDE PLNIDWDGNE LLLSDVLGTD DDIITKDLEA TVDRHLLMKA LHQLNDREKQ IMELRFGLAG GEEKTQKDVA DMLGISQSYI SRLEKRIIKR LRKEFNKMV
|
| |