| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_3661 |
|---|
| Symbol | rbgA |
|---|
| ID | 5843873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | - |
|---|
| Start bp | 3713359 |
|---|
| End bp | 3714249 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641378782 |
|---|
| Product | ribosomal biogenesis GTPase |
|---|
| Protein accession | YP_001646460 |
|---|
| Protein GI | 163941576 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000313796 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAATTC AATGGTTCCC AGGACATATG GCAAAGGCTA GACGCCAAGT AACAGAAAAA
TTAAAGTTAA TTGATGTTGT AATTGAGCTT GTAGATGCTC GATTACCTTT ATCTTCTCGT
AATCCAATGA TTGATGAAAT TATTACACAT AAACCAAGGC TTGTTGTTTT AAATAAAGCG
GATATGGCGG ATGATCGTCT TACAAAGCAG TGGATTGCAT ATTTTGATGA AAGAGGTCAA
AAGGCAATTT CAATTAATGC GCAAGCTGGA CAAGGTATGA AAGAAATTGC AGCAGCTTGT
AAAGTTCTTG TCAAAGAAAA ATTCGATAAA ATGGTTGCTA AAGGCATCAG ACCAAGAGCA
ATTCGTGCTT TAATTGTAGG TATTCCAAAC GTTGGTAAAT CTACACTAAT TAATAAATTA
GCGAAGAAGA ATATAGCAAA AACAGGAGAT CGTCCTGGTG TGACAACGGC CCAGCAGTGG
ATTAAAGTTG GGAAAGAAAT GGAATTATTA GATACACCAG GTATTTTGTG GCCTAAATTT
GAAGATGAAT TAGTTGGTCT TCGTTTAGCG ACGACTGGTG CAATTAAAGA TTCTATATTA
AATCTACAGG ATGTAGCTAT TTATGCGTTA CGTTTTATGG AAAAACATTA TCCGGAACGT
TTAAAAGAGC GATATAATTT AAATGACATT CCAGAAGAAA TTGTGGAGTT ATTTGATGCA
ATTGGAAAAA ATAGGGGTTG CTTAATGGGC GGCGGAATGA TTGATTATGA TAAAACATCT
GAGCTTATAC TTCGTGAGCT TCGTGGTGGA AGATTAGGAA AAATGACATT TGAAACACCA
GAAGAGTTTG CAGAGCAGGT AGAAGATGCG GAAAAAGTAG AAGAAGTATA A
|
|---|
| Protein sequence | MVIQWFPGHM AKARRQVTEK LKLIDVVIEL VDARLPLSSR NPMIDEIITH KPRLVVLNKA
DMADDRLTKQ WIAYFDERGQ KAISINAQAG QGMKEIAAAC KVLVKEKFDK MVAKGIRPRA
IRALIVGIPN VGKSTLINKL AKKNIAKTGD RPGVTTAQQW IKVGKEMELL DTPGILWPKF
EDELVGLRLA TTGAIKDSIL NLQDVAIYAL RFMEKHYPER LKERYNLNDI PEEIVELFDA
IGKNRGCLMG GGMIDYDKTS ELILRELRGG RLGKMTFETP EEFAEQVEDA EKVEEV
|
|---|
| |