Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_3656 |
Symbol | |
ID | 5843868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 3707073 |
End bp | 3709151 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641378777 |
Product | DNA topoisomerase I |
Protein accession | YP_001646455 |
Protein GI | 163941571 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000216314 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATT ACCTCGTAAT CGTGGAGTCG CCTTCTAAGG CGAAGACCAT TGAAAAATAT TTAGGGAAAA AATACAAAGT CGTCGCGTCC ATGGGACATG TCCGCGATTT ACCTAAAAGC CAAATGGGGA TAGAAGTAAA GAATAACTTC ACCCCGAAGT ATATTACCAT TCGTGGTAAG GGTCCCGTTT TAAAAGATTT AAAATCAGCG GCAAAAAAAG CAAAGAAAGT CTATCTCGCG GCCGATCCGG ATCGTGAAGG AGAAGCAATT GCTTGGCATT TAGCAAATAC GTTAAATGTG GACGTTGAAT CAGATTGCCG AGTTGTATTT AATGAGATTA CAAAAGATGC AATAAAAGAA TCATTTAAAT ATCCTCGTGC AATTAATATG GATTTAGTAG ATGCACAACA GGCAAGGCGT ATACTCGATC GTCTTGTTGG TTACAATATT AGTCCTTTAT TATGGAAGAA AGTAAAAAAA GGATTAAGTG CAGGACGCGT ACAATCTGTA GCAGTTCGTT TAATCATCGA ACGTGAAAAA GAAATTCAAA GTTTTGAACC TGAAGAATTC TGGACAATTA AAACAGAATT TGTGAAAGGG AAAGACACAT TTGAAGCAAG CTTTTACGGT GTAGATGGTG AAAAAGTTCA ATTAACGAAC GAAGCACAAG TGAACGAAAT AATCGAAAAG ATGAAAGACA ATGCGTTTTC GGTTGAAAAT GTAACGCGAA AAGAGCGAAA GCGTAACCCT GCATTACCGT TTACAACATC TTCCTTGCAA CAAGAGGCAG CGCGTAAGTT AAATATGCGA GCAAAGAAAA CAATGATGCT TGCACAGCAG CTGTATGAAG GGATAGATCT TGGAAAACAA GGGACTGTAG GTCTTATTAC GTATATGAGA ACTGATTCAA CACGTATCTC AGAAACAGCT CAAACAGAGG CTCGTGATTA CATTACTGAG GCGTTTGGTG CGGAATACAT AGGAACAGAG AAGAGGAAAG AAACGAAAAA GTCGAAAGCA CAAGATGCGC ATGAGGCGAT TCGTCCTACT TCGGTAATGA GAAAGCCAGA GGAACTAAAA AGTTTCTTAA GTCGTGATCA ACTCCGTTTG TATAAACTGA TTTGGGAGCG ATTTGTTGCA AGTCAAATGG CATCTGCTAT AATGGATACT GTTACAGCGA AACTCATTAA TAACAATGTT CAGTTCCGTG CAAGTGGATC AGTTGTAAAG TTCCCAGGAT TTATGAAAGT GTACGTAGAG TCGAAAGATG ATGGTGCGGA AGAAAAGGAT AAGATGTTGC CACCGTTAGA AGTAGGTGAA ACTGTATTTT CAAAAGATAT AGAACCAAAG CAACATTACA CACAGCCTCC GCCGCGTTAC ACAGAGGCTC GTCTAGTAAG AACACTTGAA GAGCTTGGAA TTGGGAGACC GTCTACTTAT GTACCGACAC TTGAAACAAT CCAAAAACGA GGATACGTTG CTTTAGATAA TAAACGCTTC GTTCCGACTG AGCTTGGTGG AATAGTAATC GAACTTATTT TAGAGTTTTT CCCAGAAATT ATTAACATTG AATTTACTGC CAATATGGAG CAAAGCCTTG ATGAAGTAGA AGAAGGAAAT GCAAATTGGG TGAAAATTGT TGATGATTTC TACGTAGGAT TTGAACCGCG CTTAGAAAAA GCGGAAAAAG AAATGCGTGA AGTGGAAATT AAAGATGAAC CAGCTGGGGA AGACTGTGAA TTATGTAGTC ACCCGATGGT CTTTAAAATG GGTAAATATG GGAAGTTTAT GGCTTGTTCA AATTTCCCGG AATGTCGTAA TACAAAACCG ATTGTAAAAG AAATCGGTGT TACTTGTCCG AAGTGTGATA AAGGGCAAAT TATTGAACGC CGTAGTAATA AAAAGAAACG CCTTTTCTAC GGATGCGGTA CGTATCCAGA ATGTGACTTT GTATCTTGGG ATAAGCCGAT TGGTCGTAAA TGTCCGAAGT GTGAAGGTAT GCTCGTAGAG AAAAAGTTAA AAAAAGGCGT GCAAGTACAA TGTATTTCGT GTGATTATGA AGAAGAACAA CAAATGTGA
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Protein sequence | MSDYLVIVES PSKAKTIEKY LGKKYKVVAS MGHVRDLPKS QMGIEVKNNF TPKYITIRGK GPVLKDLKSA AKKAKKVYLA ADPDREGEAI AWHLANTLNV DVESDCRVVF NEITKDAIKE SFKYPRAINM DLVDAQQARR ILDRLVGYNI SPLLWKKVKK GLSAGRVQSV AVRLIIEREK EIQSFEPEEF WTIKTEFVKG KDTFEASFYG VDGEKVQLTN EAQVNEIIEK MKDNAFSVEN VTRKERKRNP ALPFTTSSLQ QEAARKLNMR AKKTMMLAQQ LYEGIDLGKQ GTVGLITYMR TDSTRISETA QTEARDYITE AFGAEYIGTE KRKETKKSKA QDAHEAIRPT SVMRKPEELK SFLSRDQLRL YKLIWERFVA SQMASAIMDT VTAKLINNNV QFRASGSVVK FPGFMKVYVE SKDDGAEEKD KMLPPLEVGE TVFSKDIEPK QHYTQPPPRY TEARLVRTLE ELGIGRPSTY VPTLETIQKR GYVALDNKRF VPTELGGIVI ELILEFFPEI INIEFTANME QSLDEVEEGN ANWVKIVDDF YVGFEPRLEK AEKEMREVEI KDEPAGEDCE LCSHPMVFKM GKYGKFMACS NFPECRNTKP IVKEIGVTCP KCDKGQIIER RSNKKKRLFY GCGTYPECDF VSWDKPIGRK CPKCEGMLVE KKLKKGVQVQ CISCDYEEEQ QM
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