Gene BcerKBAB4_3656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_3656 
Symbol 
ID5843868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp3707073 
End bp3709151 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content39% 
IMG OID641378777 
ProductDNA topoisomerase I 
Protein accessionYP_001646455 
Protein GI163941571 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I 
TIGRFAM ID[TIGR01051] DNA topoisomerase I, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000216314 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATT ACCTCGTAAT CGTGGAGTCG CCTTCTAAGG CGAAGACCAT TGAAAAATAT 
TTAGGGAAAA AATACAAAGT CGTCGCGTCC ATGGGACATG TCCGCGATTT ACCTAAAAGC
CAAATGGGGA TAGAAGTAAA GAATAACTTC ACCCCGAAGT ATATTACCAT TCGTGGTAAG
GGTCCCGTTT TAAAAGATTT AAAATCAGCG GCAAAAAAAG CAAAGAAAGT CTATCTCGCG
GCCGATCCGG ATCGTGAAGG AGAAGCAATT GCTTGGCATT TAGCAAATAC GTTAAATGTG
GACGTTGAAT CAGATTGCCG AGTTGTATTT AATGAGATTA CAAAAGATGC AATAAAAGAA
TCATTTAAAT ATCCTCGTGC AATTAATATG GATTTAGTAG ATGCACAACA GGCAAGGCGT
ATACTCGATC GTCTTGTTGG TTACAATATT AGTCCTTTAT TATGGAAGAA AGTAAAAAAA
GGATTAAGTG CAGGACGCGT ACAATCTGTA GCAGTTCGTT TAATCATCGA ACGTGAAAAA
GAAATTCAAA GTTTTGAACC TGAAGAATTC TGGACAATTA AAACAGAATT TGTGAAAGGG
AAAGACACAT TTGAAGCAAG CTTTTACGGT GTAGATGGTG AAAAAGTTCA ATTAACGAAC
GAAGCACAAG TGAACGAAAT AATCGAAAAG ATGAAAGACA ATGCGTTTTC GGTTGAAAAT
GTAACGCGAA AAGAGCGAAA GCGTAACCCT GCATTACCGT TTACAACATC TTCCTTGCAA
CAAGAGGCAG CGCGTAAGTT AAATATGCGA GCAAAGAAAA CAATGATGCT TGCACAGCAG
CTGTATGAAG GGATAGATCT TGGAAAACAA GGGACTGTAG GTCTTATTAC GTATATGAGA
ACTGATTCAA CACGTATCTC AGAAACAGCT CAAACAGAGG CTCGTGATTA CATTACTGAG
GCGTTTGGTG CGGAATACAT AGGAACAGAG AAGAGGAAAG AAACGAAAAA GTCGAAAGCA
CAAGATGCGC ATGAGGCGAT TCGTCCTACT TCGGTAATGA GAAAGCCAGA GGAACTAAAA
AGTTTCTTAA GTCGTGATCA ACTCCGTTTG TATAAACTGA TTTGGGAGCG ATTTGTTGCA
AGTCAAATGG CATCTGCTAT AATGGATACT GTTACAGCGA AACTCATTAA TAACAATGTT
CAGTTCCGTG CAAGTGGATC AGTTGTAAAG TTCCCAGGAT TTATGAAAGT GTACGTAGAG
TCGAAAGATG ATGGTGCGGA AGAAAAGGAT AAGATGTTGC CACCGTTAGA AGTAGGTGAA
ACTGTATTTT CAAAAGATAT AGAACCAAAG CAACATTACA CACAGCCTCC GCCGCGTTAC
ACAGAGGCTC GTCTAGTAAG AACACTTGAA GAGCTTGGAA TTGGGAGACC GTCTACTTAT
GTACCGACAC TTGAAACAAT CCAAAAACGA GGATACGTTG CTTTAGATAA TAAACGCTTC
GTTCCGACTG AGCTTGGTGG AATAGTAATC GAACTTATTT TAGAGTTTTT CCCAGAAATT
ATTAACATTG AATTTACTGC CAATATGGAG CAAAGCCTTG ATGAAGTAGA AGAAGGAAAT
GCAAATTGGG TGAAAATTGT TGATGATTTC TACGTAGGAT TTGAACCGCG CTTAGAAAAA
GCGGAAAAAG AAATGCGTGA AGTGGAAATT AAAGATGAAC CAGCTGGGGA AGACTGTGAA
TTATGTAGTC ACCCGATGGT CTTTAAAATG GGTAAATATG GGAAGTTTAT GGCTTGTTCA
AATTTCCCGG AATGTCGTAA TACAAAACCG ATTGTAAAAG AAATCGGTGT TACTTGTCCG
AAGTGTGATA AAGGGCAAAT TATTGAACGC CGTAGTAATA AAAAGAAACG CCTTTTCTAC
GGATGCGGTA CGTATCCAGA ATGTGACTTT GTATCTTGGG ATAAGCCGAT TGGTCGTAAA
TGTCCGAAGT GTGAAGGTAT GCTCGTAGAG AAAAAGTTAA AAAAAGGCGT GCAAGTACAA
TGTATTTCGT GTGATTATGA AGAAGAACAA CAAATGTGA
 
Protein sequence
MSDYLVIVES PSKAKTIEKY LGKKYKVVAS MGHVRDLPKS QMGIEVKNNF TPKYITIRGK 
GPVLKDLKSA AKKAKKVYLA ADPDREGEAI AWHLANTLNV DVESDCRVVF NEITKDAIKE
SFKYPRAINM DLVDAQQARR ILDRLVGYNI SPLLWKKVKK GLSAGRVQSV AVRLIIEREK
EIQSFEPEEF WTIKTEFVKG KDTFEASFYG VDGEKVQLTN EAQVNEIIEK MKDNAFSVEN
VTRKERKRNP ALPFTTSSLQ QEAARKLNMR AKKTMMLAQQ LYEGIDLGKQ GTVGLITYMR
TDSTRISETA QTEARDYITE AFGAEYIGTE KRKETKKSKA QDAHEAIRPT SVMRKPEELK
SFLSRDQLRL YKLIWERFVA SQMASAIMDT VTAKLINNNV QFRASGSVVK FPGFMKVYVE
SKDDGAEEKD KMLPPLEVGE TVFSKDIEPK QHYTQPPPRY TEARLVRTLE ELGIGRPSTY
VPTLETIQKR GYVALDNKRF VPTELGGIVI ELILEFFPEI INIEFTANME QSLDEVEEGN
ANWVKIVDDF YVGFEPRLEK AEKEMREVEI KDEPAGEDCE LCSHPMVFKM GKYGKFMACS
NFPECRNTKP IVKEIGVTCP KCDKGQIIER RSNKKKRLFY GCGTYPECDF VSWDKPIGRK
CPKCEGMLVE KKLKKGVQVQ CISCDYEEEQ QM