Gene BcerKBAB4_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_3478 
Symbolhfq 
ID5843690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp3529750 
End bp3529974 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content31% 
IMG OID641378601 
ProductRNA-binding protein Hfq 
Protein accessionYP_001646279 
Protein GI163941395 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000029119 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAT CAATCAATAT TCAAGATCAG TTTTTAAATC AACTCCGTAA AGAGAATACG 
TTCGTTACGC TGTACTTATT AAATGGTTTC CAGCTTCGTG GATTAATTAA AGGATTTGAT
AATTTTACAG TCCTGCTGGA AACAGAAGGT AAGCAACAGC TTATTTATAA ACATGCAATT
TCTACATTTG TACCACAAAA AAATGTTTCA ATTGAATTAG AGTAG
 
Protein sequence
MKQSINIQDQ FLNQLRKENT FVTLYLLNGF QLRGLIKGFD NFTVLLETEG KQQLIYKHAI 
STFVPQKNVS IELE