Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_3478 |
Symbol | hfq |
ID | 5843690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 3529750 |
End bp | 3529974 |
Gene Length | 225 bp |
Protein Length | 74 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641378601 |
Product | RNA-binding protein Hfq |
Protein accession | YP_001646279 |
Protein GI | 163941395 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000029119 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAT CAATCAATAT TCAAGATCAG TTTTTAAATC AACTCCGTAA AGAGAATACG TTCGTTACGC TGTACTTATT AAATGGTTTC CAGCTTCGTG GATTAATTAA AGGATTTGAT AATTTTACAG TCCTGCTGGA AACAGAAGGT AAGCAACAGC TTATTTATAA ACATGCAATT TCTACATTTG TACCACAAAA AAATGTTTCA ATTGAATTAG AGTAG
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Protein sequence | MKQSINIQDQ FLNQLRKENT FVTLYLLNGF QLRGLIKGFD NFTVLLETEG KQQLIYKHAI STFVPQKNVS IELE
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