Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_2594 |
Symbol | |
ID | 5842806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 2658830 |
End bp | 2659474 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641377746 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_001645424 |
Protein GI | 163940540 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000243601 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCATT CAAATATAAA TTTTTTAATT AAACATTATG CAGAGGTAAA AAGATACTGT ACGTTTTTGA CGAAAAACAA ATGGGATGGG GAAGACCTTG CCCAAGAAGC AATTTGCAAA GTTCTTCAAA AGTATAGTGA GAAGGAAATT TGTATAACGC TTCTGTATAA AATTGCTCGA AATCAATGGT TAGATCAAAT GAAATCAAAA TCCGTTCAAG AAAAGTTAGA ACAGCAAAAT ACATTTGAAG AACCACATGG GAAAATTGCA GATTTGCATG AAATGGTAGG GAAAGTATTG TCTTCGTTAA ATGTGCAACA ATCCGTAATT TTATTATTGA AGGATGTTTT TCAATATAGT ATCGCGGATA TTGCAAAAAT ATGCTCTGTA TCAGAAGGGG CAGTGAAAGC ATCTTTATTT AGGAGTAGAA ATAGGCTGAA AACTGTAAAT GAAGAAGGCA TTGAAATAGT GGAGTACACG GATGATGTTG AAATCGTTGT AACTTCTATT CGAGAAGAAA GACCTGAATT GTTGACGAAA CTTCTCCCAA CAATAGATTT CACTAAGTTA CCATCAATAC AACCAGTGTT ATTCTTCAGT ATGAAACAAT CTTCTTCTTA CAGTTGTATG CTTAATGCGG CATAA
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Protein sequence | MNHSNINFLI KHYAEVKRYC TFLTKNKWDG EDLAQEAICK VLQKYSEKEI CITLLYKIAR NQWLDQMKSK SVQEKLEQQN TFEEPHGKIA DLHEMVGKVL SSLNVQQSVI LLLKDVFQYS IADIAKICSV SEGAVKASLF RSRNRLKTVN EEGIEIVEYT DDVEIVVTSI REERPELLTK LLPTIDFTKL PSIQPVLFFS MKQSSSYSCM LNAA
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