Gene BcerKBAB4_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_1110 
Symbol 
ID5841322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp1184766 
End bp1185659 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content40% 
IMG OID641376307 
ProductRluA family pseudouridine synthase 
Protein accessionYP_001643987 
Protein GI163939103 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACAGAT TTACATTGAA ATGGGATATA GGGCTGGCTG AAGAGGGAAC TTTAGTTAGA 
GAATTTTTGA AAACAAAAGG GATTTCGAAA GCTGCTTTAA CGGATATAAA GTTCCGCGGG
GGAGCAATTG AAGTAAACGG TCAACACACA AGTGTTCGTC ACAAGTTACA AGCTGGTGAA
GAGTTACAAA TCTTTTTTCC AGTGGAGGAA AGAAGTGAAG GGATGGAAGT GGAAGATATC
CCTTTATGTA TCGTATATGA AGATGACGCG GTTCTTGTTA TAAATAAAGA AGCAAATATG
TCGACGATTC CGTCTAGGGA GCACCCGTCA GGAAGTATTG CAAACGCTCT TTTATATCAT
TATGATAAAC AAAATCTTGC AAGTACGGTG CACATTGTGA CGAGGTTAGA CCGTGATACT
TCAGGGCTTA TGTTAATTGC GAAAAATAGA TTCGTTCACC ATCTTTTATC GAAGCAGCAT
CAACAAAAAG GGGTGAAACG AACGTATGAG GCAATCGTTC ATGGGACTAT TTTAGAAGAA
GTAGGAACGA TTGACGCGCC AATCGGACGA AAAGCGGATA GTATTATCGA GCGAACTGTT
TGTGAAGATG GTCAAAGAGC TGTTACTCAT TTTAGAGTGA TGGAGAGTTC TTCCGATAAG
ACGCATGTAG CGCTTGAGCT CGAGACGGGA AGAACACATC AAATTCGTGT ACATATGGCA
TATATAGGAC ATCCGCTACT TGGGGATGAT CTATACGGTG GCCGAAGAGA TGTGATAAAA
CGTCAAGCGC TGCATAGTAC ATCTTTGACG TTTTATCATC CTATTTTAGA AAAGGGAATG
ACTTTTACCG TAAGTATCCC AGAGGATATG CAATACGCTT TACATAACAA TTAA
 
Protein sequence
MNRFTLKWDI GLAEEGTLVR EFLKTKGISK AALTDIKFRG GAIEVNGQHT SVRHKLQAGE 
ELQIFFPVEE RSEGMEVEDI PLCIVYEDDA VLVINKEANM STIPSREHPS GSIANALLYH
YDKQNLASTV HIVTRLDRDT SGLMLIAKNR FVHHLLSKQH QQKGVKRTYE AIVHGTILEE
VGTIDAPIGR KADSIIERTV CEDGQRAVTH FRVMESSSDK THVALELETG RTHQIRVHMA
YIGHPLLGDD LYGGRRDVIK RQALHSTSLT FYHPILEKGM TFTVSIPEDM QYALHNN