Gene BcerKBAB4_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_1020 
Symbol 
ID5841232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp1098480 
End bp1098965 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content37% 
IMG OID641376219 
ProductRNA polymerase sigma factor 
Protein accessionYP_001643899 
Protein GI163939015 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02950] RNA polymerase sigma factor, SigM family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.585247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACGCA AACAATCATT AGAAGAAATT TACTCCGAGC ATATGCAAGA TTTATTTCGC 
TATCTTCTCT CCCTAACCGG AGATTCTCAT AGTGCTGAAG ATCTCATGCA AGAAACATTT
TACCGAATGC TCGTCCATAT TGACTATTAT AAAGGAGAAG AAATTAGGCC GTGGTTATTT
ACAATCGCCT ACAACGCCTT TATCGATTGG TACCGAAAAG AAAAGAAGTA TAAAACAACG
CAAATTGAAG AATTCCATTT ACCAAACGTG CCAAGTACAG AACACTCTTA TTTCGTAAAA
CATGAGATTG CTAGTTGGTT ACAAAGTATA TCCTCTCTTC CGCTCGAAAG ACGAAATGTG
TTACTACTAC GAGATTACTA CGGATTCTCT TATAAGGAAA TAGCAGAAAT GACTGGTCTC
TCGTTAGCAA AAGTAAAAAT TGAATTACAC CGAGGACGAA AAGAAACGAA AAGCATAAAG
GAGTGA
 
Protein sequence
MKRKQSLEEI YSEHMQDLFR YLLSLTGDSH SAEDLMQETF YRMLVHIDYY KGEEIRPWLF 
TIAYNAFIDW YRKEKKYKTT QIEEFHLPNV PSTEHSYFVK HEIASWLQSI SSLPLERRNV
LLLRDYYGFS YKEIAEMTGL SLAKVKIELH RGRKETKSIK E