Gene BcerKBAB4_0287 details

Gene Information

• Locus tag: BcerKBAB4_0287
• Symbol: ligA
• ID: 5840457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus weihenstephanensis KBAB4
• Kingdom: Bacteria
• Replicon accession: NC_010184
• Strand: +
• Start bp: 331064
• End bp: 333073
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 641375458
• Product: NAD-dependent DNA ligase LigA
• Protein accession: YP_001643181
• Protein GI: 163938297
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II)
• TIGRFAM ID: [TIGR00575] DNA ligase, NAD-dependent

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAAG AGATAGCCAA AAAACGTATA GAAGAATTGC GTGATTTGTT AAATACATTT 
AACTATCAAT ATCACGTATT AGACAATCCT TCTGTTTCTG ATGCGGAATA TGACCGTGAT 
ATGCAGGAGC TTATAAAATT AGAAGCAGAG AACCCAGAGT TTATGAGTGA AGACTCTCCC 
TCCATTCGCG TTGGGGGGAC TGTTCTTGAT ATATTTGAAA AGGTAACGCA TAAATCACCA 
ATGTTAAGTT TAGGAAACGC GTTTAATGAA GGAGATTTGC GTGATTTTGA TCGAAGAGTA 
CATCAGGGAA TTGATGATGC GAATGTAAGA TATATATGCG AATTAAAAAT TGACGGACTT 
GCTGTTTCAC TTCATTATGA AAAAGGACGC TTCATTCAAG GAGCAACACG TGGTGATGGT 
ATAACGGGTG AAGATATTAC CCAAAACTTA AAAACGATTA AAGCTATCCC GCTGCGTTTA 
AATGAAGAAG TAACGTTAGA AGCACGAGGC GAGGCTTATA TGCCGAAGCG TTCATTCGTT 
AAATTGAATG AAGAGAAAGA ACAAAATGGT GAAGATGTAT TTGCGAATCC ACGTAATGCG 
GCAGCAGGAT CGATACGCCA ACTTGATCCG AAAATTGCAG CGAAGCGTAA CTTATCTATG 
TTTGTGTATG GTCTTGCTAA TGTAGAAGAA AAAACAATTC CATCCCACAG TGAATCACTG 
GATTTCTTAG GTGAGCTTGG ATTTAAGACG AATCCAAATC GTCGTACATG TGAAACAATT 
GAAGACGTAA TAGCCTATGT AGAAGAGTGG CAAGAAAAAC GCCCGCATCT TGATTATGAG 
ATTGACGGAA TCGTTATAAA AGTAGACGAT GTTGCTATTC AAGAAAGCTT AGGAACTACA 
GCAAAGAGTC CAAGATGGGC AATAGCTTAT AAATTCCCAG CTGAAGAAGT TGTGACGAGA 
TTAACAGGGA TTGAATTAAG TGTCGGCCGC ACAGGAGTTG TAACACCAAC TGCAGAGCTC 
GAGCCAGTTA GAGTGGCTGG TACTATCGTT CGTCGTGCTT CTTTACATAA CGAAGATTTA 
ATTCGTGAAA AGGATATTCG AATTGGTGAC TACGTTGTTG TGAAAAAGGC TGGAGATATC 
ATTCCTGAAG TTGTGAACGT TATTTTTGAT AAGCGTACTG GTGAGGAAGA AGAATATCAT 
ATGCCAACGC ATTGTCCAGC ATGTGAGAGT GAACTTGTTC GTTTAGAAGA AGAAGTAGCA 
CTTCGATGTA TAAATCCGAC TTGCCCAGCT CAAATTCGTG AAGGATTAAT CCATTTCGTT 
TCAAGAAATG CAATGAATAT TGATGGACTT GGAGAACGTG TAATTACACA ACTCTTTGAT 
GCGGATTATA TTCGTACGTT TGCTGATTTA TATTCATTGA CGAAAGAGCA ATTATTAGAA 
CTAGAACGTT TCGGTGAAAA ATCAGCAACA AATTTAGTCC AAGCAATTGA GAATTCTAAG 
GAAAACTCAT TAGAGCGATT ATTATTCGGT CTTGGTATTC GTCATGTCGG TGCGAAAGCG 
GCACGTACAT TTGCTGAGCA TTTTGAAACG ATGGATGAGC TTGTGAAAGC GACGGAAGAA 
GAATTAAAAA CAATTAATGA GATTGGTGAA AAAATGGCTC AATCCGTTGT AACGTATTTC 
GATAATGAAG ACGTATTAGA GCTATTACAA CAATTTAAAG AGTATGGCGT GAACATGGCA 
TACAAAGGTA TAAAAATTGC TGATTTACAA AATGTTGAAT CGTACTTCGC AGGAAAAACT 
GTCGTCTTAA CAGGGAAATT AGAAGTTATG GGCCGCAGTG AAGCGAAGAA GAAAATTGAG 
GCATTAGGTG GAAAAGTAAC AGGAAGTGTT AGTAAAAGTA CGGATTTACT TGTTGCTGGT 
GAAGCTGCAG GCTCGAAATT AGCGCAAGCA GAGAAGCACA ATGTTGAAGT TTGGAATGAA 
GAGAGGTTCT TACAAGAGCT GAATAAGTAA 

 

Protein sequence

MSKEIAKKRI EELRDLLNTF NYQYHVLDNP SVSDAEYDRD MQELIKLEAE NPEFMSEDSP 
SIRVGGTVLD IFEKVTHKSP MLSLGNAFNE GDLRDFDRRV HQGIDDANVR YICELKIDGL 
AVSLHYEKGR FIQGATRGDG ITGEDITQNL KTIKAIPLRL NEEVTLEARG EAYMPKRSFV 
KLNEEKEQNG EDVFANPRNA AAGSIRQLDP KIAAKRNLSM FVYGLANVEE KTIPSHSESL 
DFLGELGFKT NPNRRTCETI EDVIAYVEEW QEKRPHLDYE IDGIVIKVDD VAIQESLGTT 
AKSPRWAIAY KFPAEEVVTR LTGIELSVGR TGVVTPTAEL EPVRVAGTIV RRASLHNEDL 
IREKDIRIGD YVVVKKAGDI IPEVVNVIFD KRTGEEEEYH MPTHCPACES ELVRLEEEVA 
LRCINPTCPA QIREGLIHFV SRNAMNIDGL GERVITQLFD ADYIRTFADL YSLTKEQLLE 
LERFGEKSAT NLVQAIENSK ENSLERLLFG LGIRHVGAKA ARTFAEHFET MDELVKATEE 
ELKTINEIGE KMAQSVVTYF DNEDVLELLQ QFKEYGVNMA YKGIKIADLQ NVESYFAGKT 
VVLTGKLEVM GRSEAKKKIE ALGGKVTGSV SKSTDLLVAG EAAGSKLAQA EKHNVEVWNE 
ERFLQELNK