| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_0207 |
|---|
| Symbol | |
|---|
| ID | 5840231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | + |
|---|
| Start bp | 218072 |
|---|
| End bp | 219775 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641375348 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001643103 |
|---|
| Protein GI | 163938219 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGG TTTTTAAAGG GTTACTTGTT ACGTTTCTTA GTACATCGGT TTTATTAGCA
GGATGTGCTC AAGAAGAGAC AAGTACAAAT GAAGCAACAA AGATGCCGAA AGTAAAAGAT
GAGTTTATTA AAGCGAGTGA CAAAGCAAAA AGTCCAGCAA AGGCAAAAGA AAGAAAGGAT
ACCTTTGTAG TGGGAATGCC GAGCCCTGGC GGGATATTCC TTCCGCATTT TATGGAAAAT
GGGTGGGATG GTAATATAAC ACAAGCTATC TTTGCTCCTC TCGTTGGATT GGATAAGGAG
GGGAAACCAA TTCCAATTCT AGCGAAGAAA TGGGATATTT CGGAGGATCA GCTTACATAT
ACGTTTCATT TGAAAGATGA TTTAAAGTTT AGTGATGGTT CACCGTTAAC AGCGGATGAC
GTAGCATTTA CATTAACTTT ACTACATGAT CCAACTTATA GTGGTGCAAC GGACATAAGC
CAAACAGCAA TAAAGGGTGG GCAAGCATAT AAAGAAGGAA AGGCTACATC TATTGAGGGG
ATTCAAGTCA TCGATCCGAA AACAATTACG ATTACAACTG AAAAGGTAAA TGCCCAAACA
TTATCGTTAA TTGGTGGAGA AGTTATATCA AAAGCTTATT ACGGTAAAGA ATATAAGCAA
GGGAATTTAG AGTATTTAAA AGAGTTATAT GGAAAACCGA TGGGAGCAGG AGCTTATAAA
CTAGATAAAT ATATTCCAGG TCAAGAAGTT CGTTTTGTAG CAAATGAAAA TTATTTTGAA
GGTAAACCGA AGATTGAGCA CTTTATTTAT AAAATTACAA AAGGTGATAC GAAGCTACAA
CAATTTCAAG CGGGCGAAGT AGATTATGAT GGCTTCACGA CAAATGCGGA GACGATTGAA
CAATTAAAAG AGTTAGGCTT TGCTAATGTT AATGTGTATA CGGGAAGTTC ATACGGTTAC
ATTAAAATGA ATTATAAGAA GTCATACTTT AAAGATAAAC GTGTACGCCA AGCGTTTATT
TATGGATTAG AGCGTCAAAA GGTCATTGAT ACATATTTCC AAGGATATGC TTCACTCGTT
AATGTACCAA TTACACCAGT TTCGTGGGCG TATACAGAAG AAGGAATCAA TAAATACGAA
TATAATTTAG AAAAGGCGAA GAAATTGCTC GATGAAGCTG GGTGGAAAGC TGGATCAGAT
GGTATTCGTG AAAAAGATGG CCAAAAATTG AAGGTAAGTT ATTTTGCTTC TTCTGCAAGT
AAAATCAATG ATGTGATGAT CCCCGTTATG AAGGAGGATT ATAAAAAGAT TGGGGTAGAT
TTCAATCCTG AATACATGGA CTTTAATACG ATGATTTCCA AGGTAATTAA AGGAGATTAT
GATTTAGCGA TGGTCTCCAC ACCGATGATT GATGATCCGA GCGGAACAAT TGAGGAGTTT
GTTTCGACAA GTAAGCGTAA TTATGATGGA TATCATAATC CGAAAGTAGA TGAATTAGCT
AAGCAGGCAT TAGAAACATT GGATATTGAA AAACGAAAAG AGATCTATAA AAAACTATAT
CAAGAGTTAA GTGAAGATCC ACCTGTTATT TTCTTAAACA ATAGTAAAGT CGTGTCTGCA
CATAATGCAC GAATTCAAGG GTTACAAGAA GATAATTATA ATGGTATTTT GTTAAGTTTA
CCTAAATTGA ATATTGCTCA ATAA
|
|---|
| Protein sequence | MRKVFKGLLV TFLSTSVLLA GCAQEETSTN EATKMPKVKD EFIKASDKAK SPAKAKERKD
TFVVGMPSPG GIFLPHFMEN GWDGNITQAI FAPLVGLDKE GKPIPILAKK WDISEDQLTY
TFHLKDDLKF SDGSPLTADD VAFTLTLLHD PTYSGATDIS QTAIKGGQAY KEGKATSIEG
IQVIDPKTIT ITTEKVNAQT LSLIGGEVIS KAYYGKEYKQ GNLEYLKELY GKPMGAGAYK
LDKYIPGQEV RFVANENYFE GKPKIEHFIY KITKGDTKLQ QFQAGEVDYD GFTTNAETIE
QLKELGFANV NVYTGSSYGY IKMNYKKSYF KDKRVRQAFI YGLERQKVID TYFQGYASLV
NVPITPVSWA YTEEGINKYE YNLEKAKKLL DEAGWKAGSD GIREKDGQKL KVSYFASSAS
KINDVMIPVM KEDYKKIGVD FNPEYMDFNT MISKVIKGDY DLAMVSTPMI DDPSGTIEEF
VSTSKRNYDG YHNPKVDELA KQALETLDIE KRKEIYKKLY QELSEDPPVI FLNNSKVVSA
HNARIQGLQE DNYNGILLSL PKLNIAQ
|
|---|
| |