Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_0072 |
Symbol | lysS |
ID | 5840408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | + |
Start bp | 80379 |
End bp | 81878 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641375187 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001642969 |
Protein GI | 163938085 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000341012 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAACA TGAACCACGA AGAATTAAAC GACCAATTGC TTGTTCGTCG TGAAAAGCTA CATAATTTAC GTGAGCAAGG AATCGATCCG TTCGGTAAAC GATTTGAACG CACAAATTCA ACAACTGACT TAGTAAGTCT ATATGGAGAA TTCTCTAAAG AAGAATTAGA AGAGAAAGAA ATCACTGTTT CTATCGCTGG TCGTATTATG ACAAAACGCG GTAAAGGAAA AGCGGGATTT GCGCATATTC AAGATTTACA GGGGCAAGTT CAAATTTATG TGCGTAAAGA TACTGTTGGA GATGAAGAGT ACGAGTTATT TACGACAGCA GATTTAGGTG ACTTAGTAGG TATTGAAGGT AAAGTGTTCA AAACAAACGT TGGAGAACTT TCAGTAAAAG CAATAGGATT TACACTTTTA ACGAAATCCC TTCGTCCATT ACCGGATAAA TACCATGGAT TAAAAGATGT TGAACAACGC TATCGTCAAC GTTACTTGGA CTTAATTACA AGTATGGAAA GCCGTGAAAC GTTCGTTACC CGTAGTAAAA TTATTCGTGA AATGAGAAGA TATTTAGATG ACAACGGTTA TCTTGAAGTG GAAACGCCTA TGATGCACGC GATTGCAGGT GGAGCGTCTG CTCGTCCTTT CACTACACAC CATAATGCGT TAGATATGGA ATTATATATG CGTATCGCAA TTGAACTTCA TTTAAAACGT CTTATTGTGG GTGGATTAGA AAAGGTTTAT GAGATCGGCC GTGTATTCCG TAATGAGGGT GTATCAACTC GTCATAACCC TGAGTTTACG ATGATTGAAT TATATGAAGC GTACGCTGAT TATAATGATA TTATGAAACT AACAGAAAAT ATGGTTGCTC ATATCGCGAA AAAAGTATTG GGTACAACAA CAATCCAATA TGGTGATTAT GAAATTAATC TAGAGCCAGA ATGGACACGT CTTCATATGG TAGATGCAAT TAAGCAACAC TCTGGAGCAG ATTTCTGGAA TCCAATGAGT GTAGAAGAAG CGCGTGAACT TGCAAAAGAA CATAATGTGG AAATTAAGAA TACAATGGAA GTTGGTCATA TTATTAATGA GTTCTTCGAA CAAAAAGTAG AAGATAAATT AATCCAACCA ACATTTATTT ACGGTCATCC GGTAGAAATT TCGCCACTTG CGAAAAAGAA TGACGAAGAT CCACGATTCA CAGATCGTTT CGAGTTATTT ATCGTTGCGC GTGAACATGC AAATGCATTC ACTGAGTTAA ATGATCCAAT CGATCAAAAA GAACGTTTTG AAGCTCAACT AAAAGAGCGC GAGCAAGGTA ATGACGAAGC TCACATGATG GATGATGATT ATATCGAAGC TCTTGAGTAC GGTATGCCTC CTACGGGTGG GTTAGGAATC GGTATTGATC GTCTTGTTAT GTTATTAACA AACGCACCAT CCATTCGTGA CGTACTATTA TTCCCAGCTA TGCGCCATAA ACAAGACTAA
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Protein sequence | MDNMNHEELN DQLLVRREKL HNLREQGIDP FGKRFERTNS TTDLVSLYGE FSKEELEEKE ITVSIAGRIM TKRGKGKAGF AHIQDLQGQV QIYVRKDTVG DEEYELFTTA DLGDLVGIEG KVFKTNVGEL SVKAIGFTLL TKSLRPLPDK YHGLKDVEQR YRQRYLDLIT SMESRETFVT RSKIIREMRR YLDDNGYLEV ETPMMHAIAG GASARPFTTH HNALDMELYM RIAIELHLKR LIVGGLEKVY EIGRVFRNEG VSTRHNPEFT MIELYEAYAD YNDIMKLTEN MVAHIAKKVL GTTTIQYGDY EINLEPEWTR LHMVDAIKQH SGADFWNPMS VEEARELAKE HNVEIKNTME VGHIINEFFE QKVEDKLIQP TFIYGHPVEI SPLAKKNDED PRFTDRFELF IVAREHANAF TELNDPIDQK ERFEAQLKER EQGNDEAHMM DDDYIEALEY GMPPTGGLGI GIDRLVMLLT NAPSIRDVLL FPAMRHKQD
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