Gene BcerKBAB4_5592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5592 
Symbol 
ID5839717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010180 
Strand
Start bp191829 
End bp192647 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content36% 
IMG OID641374745 
Productpolysaccharide deacetylase 
Protein accessionYP_001642541 
Protein GI163943311 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATA TCACCAATAT AAAGCGCATT GTAATTACAA TTGTTGCAAT TGCAATTGCA 
ATTGGTTACT TTATGTTTCA AACTATTACT TCATCAGCTA CAGCTGTAGC TAAGCAAGAA
AACCCAGTGC AGCTAGTAAG CGCTCAACCC GAAACTGAAA TAAAGAAAGC AGTACCAGTT
CGCCTTAATG GTCAAGAGAG AAAAGTGGCT TATCTTACTT TTGATGACGG TCCAGGAAAG
TATACGGCAC AGTTACTAGA CATATTAAAG GAGAATGATG CAAAAGCAAC ATTTTTTCTA
ATTGGTCAAA ATGTAAAATC TTATCCTGAA TTAGTAAAAC GAGAAGAAGT GGAAGGGCAT
TATGTTGGAA TGCATAGTAT GACGCACGAT TATAAGAAAC TGTATACTCA AGCTGGCTAT
GTAGATGAAA TGAAAGAGGA TCAAAGTTTA ATTGCTAGTA TTCTTGGACA TGCACCAAAA
CTAACACGTC CACCATATGG TTCAATGCCA GGATTACATG AAGAACTTCG TAATAAAGCT
GTAGAAGATG GTCTTAGAGT ATGGGATTGG ACAATTGATT CATTAGATTG GGAATATAAT
AGTGTACCAA TTGATACTGC GAAAGCGAAA ATTGTTCAAA ATGTACTGGC TGGTGCGACG
GATCCAAAAG AAGTTATTTT GATGCATGAC ATTCATCCGC AGTCCGTTGC TGCAGTACCT
GCTATTATTA AGGGTTTAAA AGAAAAAGGG TATGAATTTG AAGCATATCA TGAAGATGAT
CATTTCCCAT TGAACTTTAT GCATGATAAA CGTATGTAA
 
Protein sequence
MRNITNIKRI VITIVAIAIA IGYFMFQTIT SSATAVAKQE NPVQLVSAQP ETEIKKAVPV 
RLNGQERKVA YLTFDDGPGK YTAQLLDILK ENDAKATFFL IGQNVKSYPE LVKREEVEGH
YVGMHSMTHD YKKLYTQAGY VDEMKEDQSL IASILGHAPK LTRPPYGSMP GLHEELRNKA
VEDGLRVWDW TIDSLDWEYN SVPIDTAKAK IVQNVLAGAT DPKEVILMHD IHPQSVAAVP
AIIKGLKEKG YEFEAYHEDD HFPLNFMHDK RM