Gene BcerKBAB4_5509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5509 
Symbol 
ID5839685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010180 
Strand
Start bp109525 
End bp110193 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content40% 
IMG OID641374674 
Productintegrase catalytic region 
Protein accessionYP_001642470 
Protein GI163943240 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.384257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAGGC AAAATTCGTT CAAATGGAAG CACTATCAGC CTGATATTAT TTTGCTAACA 
GTAAGATGGT ACCTACGGTA CAATCTAAGT TTTCGTGATT TAGTGGAAAT GATGGAGGAG
CGAGGTTTGT CCATTGCTCA CACTACCATC ATGCGATGGG TACATCAATA TAGCCCTGAG
TTAGACAAAC GAGTTCGACG CTATTTAAAG AAAACCAAGG ATTCTTGGAG AGGCGATGAG
ACATATGTAA AAGTCAAAGG GAAATGGATG TACTTGTATC GTGCTGTGGA TTCTGAAGGA
AATACCATCG ATTTTTATCT GAGCAAGAAT AGAAATGCTA AATCAGCCAA GCGCTTCTTG
AAGAAAGCCT TGGCTTCCTG TCATTCCGTA ACACCTCGAG TGATTACAGT CGATAAGAAC
CTAGCATATC CTGTTGCTAT CAAAGCATTA CATGAAGAAA AAAGCATGCC GATAGGTGTG
AAGTTGAGGC AAATTCGGTA TTTAAATAAC ATTGTGGAAC AGGATCACCG CTTTATCAAG
AAACGCATAC GTACTATGTT AAGTTTAAAG TCCTTTCGGA CTGCCAAATG GATTCTTGCT
GGGATTGAAG CCATGCATAT GATGAAAAAA GACAAACCTC TCAAGAGAAG TCTGTCCAAA
ATCAAGTGA
 
Protein sequence
MNRQNSFKWK HYQPDIILLT VRWYLRYNLS FRDLVEMMEE RGLSIAHTTI MRWVHQYSPE 
LDKRVRRYLK KTKDSWRGDE TYVKVKGKWM YLYRAVDSEG NTIDFYLSKN RNAKSAKRFL
KKALASCHSV TPRVITVDKN LAYPVAIKAL HEEKSMPIGV KLRQIRYLNN IVEQDHRFIK
KRIRTMLSLK SFRTAKWILA GIEAMHMMKK DKPLKRSLSK IK