| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4721 |
|---|
| Symbol | |
|---|
| ID | 5832237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 5273292 |
|---|
| End bp | 5274569 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641370518 |
|---|
| Product | DNA polymerase IV |
|---|
| Protein accession | YP_001642160 |
|---|
| Protein GI | 163854117 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.469065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGACCCT TCTGCCGCGA TTGCCTGACG ATGCAAGCCG ACGGCGCCCT GCGCTGCCGG
GGATGCGGCT CGCCGCGCCT GCTCTCGCAC GCGGCCCGCG ACGCCTTGAG CATCGCCCAT
GTCGATTGCG ACGCCTTCTA CGCAGCGATC GAGAAGCGCG ACGACCCGTC CCTGCGCGAC
AAGCCGCTCA TCATCGGCGG GGGCAAGCGC GGCGTCGTCT CCACCGCATG CTATCTCGCC
CGGATCTCCG GCGTGCGCTC GGCGATGCCG ATGTTCGAGG CGTTGAAGCG CTGCCCCGAC
GCCACAGTAC TGCGGCCGGA TATGGAGAAA TACGCCCGCG TCGGGCGCGA GGTGCGGGCG
ATGATGCTGG CGCTGACGCC TTTGGTCGAG CCGGTCTCCA TCGACGAGGC GTTCCTCGAC
CTCTCCGGCA CCGAGCGCCT ACACGGGACG AGCCCGGCGC TCACGCTCGC CCGCTTCGCC
GCACGGGTCG AGGCGGAGGT CGGCATCACC GTGTCGGTGG GACTGTCCGA CAACAAGTTC
CTGGCCAAGA TCGCCTCGGA CCTCGACAAG CCGCGCGGCT TCTCGATCAT CGCGGGCGAG
GATGCCGCGA CCTTCCTCGC CGACAAGCCG GTCGGCATCC TGCCCGGCAT CGGCGAGAGC
GCGCGAAACC GCCTCGCTGC CCTCAACATC CACCGCGTCG GCGACATCCC GCGGGTCGAT
CCGACGCGTC TCCAAGCCTC CCTCGGGCGC GATGCGCTGC GTCTCATCGA TCTCGCCGCC
GGCCGGGACC GGCGGCCGGT GCGCCCGACC CGGGAGGCCA AGAGCGTCTC GTCCGAGACG
ACCTTCTCGG CCGATCTCAC CCGGTTCGAG GATCTGCGGC CGATCCTGTG GCAGCTCTGC
GAAAAGGTGT CGGCACGGCT CAAGCGGGCG GAACTCGCCG CCGGCAGCGT CACGCTGAAG
CTGAAGGATG CCCGATTCCG GCTGCGCACC CGCACCCGCG GTGGACTGAA ACCCACCCAG
CTCGCCGACC GGCTCTTCCG CGAGGGCGAG CCCATGCTGC GGGCGGCCTG CGACGGCACG
GCCTTCCGGC TGATCGGCAT CGGCGGCGGC GATCTCTGCG GCGCGATCCA TGCCGACCGC
GGCGATCTCG CCGATCAGGG TATCGAACGC GTCGCCCGCC GCGAGGCAGC GCTCGACCGG
CTGCGGGAAA AGTTCGGCAG CGCCGCGATC CAGCGCGGGC TCGTCTTCAC CGGCGAGCCG
GAGCGGCGCC GGACCTGA
|
|---|
| Protein sequence | MRPFCRDCLT MQADGALRCR GCGSPRLLSH AARDALSIAH VDCDAFYAAI EKRDDPSLRD
KPLIIGGGKR GVVSTACYLA RISGVRSAMP MFEALKRCPD ATVLRPDMEK YARVGREVRA
MMLALTPLVE PVSIDEAFLD LSGTERLHGT SPALTLARFA ARVEAEVGIT VSVGLSDNKF
LAKIASDLDK PRGFSIIAGE DAATFLADKP VGILPGIGES ARNRLAALNI HRVGDIPRVD
PTRLQASLGR DALRLIDLAA GRDRRPVRPT REAKSVSSET TFSADLTRFE DLRPILWQLC
EKVSARLKRA ELAAGSVTLK LKDARFRLRT RTRGGLKPTQ LADRLFREGE PMLRAACDGT
AFRLIGIGGG DLCGAIHADR GDLADQGIER VARREAALDR LREKFGSAAI QRGLVFTGEP
ERRRT
|
|---|
| |