| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4696 |
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| Symbol | |
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| ID | 5831848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5252291 |
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| End bp | 5253784 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641370491 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001642135 |
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| Protein GI | 163854092 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCG GGGCATTTGC TGAGGCGACG CACCGGAGCG GACACGGCAG TGCGGCGGGA
CGGCATATCG AGAAACCGCA AGGGCTGATC GACGTGAAAG AACGGAACCC TGCGGCGCGG
TCCGCGCTTC GGCTGGCTGG CGCCGTCGTC TCGGCACTGG CTGTCGCAAG TCCGGCGGCT
GCCGAGACCC TCGAGAGCGC GTTGTCCCGC GCCTATCAGG CCAACCCGGC GCTTAACGCG
GCGCGGGCGA ACCTGCGCGC GACCGACGAG GATGTGAATC GCTTCCAGGC CGGCTACCGA
CCGAACGCCG CGCTTTCGGC TGACATCGGC ATCCAGCAAT TCCAGGGTAA GATCGGCGGC
GTCGGCGCGA GCGGGCCGAT CAATCTCACG ACTCGCCCGG GCGGCGCCGG CCTGACCATC
AACCAGAACG TCTTCGACGG CTTTCAGACC GACAATCGGG TGCGCGCGGC CGAATCGACC
GTGCTCAGCA CGCGGGAAGG CCTGCGCCAG ACCGAGATGA ACACGCTGTT CAATGCCGCT
CAGGCCTACA TGAACGTCCT GAGCGACACG GCGACGTTGG AGCTTCAGCG CAACAACGTC
GAGGTGCTCG AAGAGCAGCT CCGTCAGACT CGCGACCGCT TCAATGTCGG CGAGGTGACC
CGCACCGACG TCGCCCAGGC CGAAGCACGA CTGGCCGGCG CCCGCTCCCA GGTGAGCGCG
GCGGAGGCGG CCCTGCGTGC CTCGATCGGC ATCTTCCGCC AGATCGTCGG CGTCGAGCCG
CGCCAGCTCG CCCCCGGGCG CCCGCTCGAC CGCTACGTGC CGGCCTCGCT CGATCAGGCG
ATTCTCATCG GCCTGAAGGA GCATCCGCAG ATCCTCGCTT CGCTGCACGC CGTGGACGTG
GCGGAACTGC AGGTGAAGGT GAACGAAGGC GCGCTCTATC CGCAGGCGCA GATCACCGGA
GCGGTGCAGC AGCGGTACGA TCAGCAGTTC CCCGGCGACA ACGGCGTCAC CGCCTCGATC
GTCGGACGGG TCAACATTCC GCTCTATCAG GGTGGCGCCG AATACGCCGC GATCCGGCAG
GCCAAGGAGA ATGTCGGGCG CGCCCGCCTC GTCGCCGACC AGGACCGCGA CACCATCCGC
GCCTCGATCG TGCGGACCTG GGGCAATCTC GAAGCCTCGA AGGCGCAGGT GATCGCATCA
CAGGCGCAGG TTCAGGCCAA CGAGGTGGCG CTGAACGGCG TGCGTGAGGA GGCTCGCGTC
GGCCAGCGCA CCACCCTCGA CGTGCTGAAC GCGCAGCAGG AACTGCTCTC CGCGCGCGTC
GCCCTGATCC GCGCCCAGCG CGACCGCGTG GTGAACTCCT ACGATGTCGT CCAGGCCGTC
GGCCGGCTCA CCGTCCGCTT CACCAGCCTG CCGGTCACGC CGTACAGCGC CCGTGAACAT
CTCGATCAGG TGCGCGATCT CTGGTTCGGC CTGCGCACCC CCGACGGGCG CTGA
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| Protein sequence | MSSGAFAEAT HRSGHGSAAG RHIEKPQGLI DVKERNPAAR SALRLAGAVV SALAVASPAA
AETLESALSR AYQANPALNA ARANLRATDE DVNRFQAGYR PNAALSADIG IQQFQGKIGG
VGASGPINLT TRPGGAGLTI NQNVFDGFQT DNRVRAAEST VLSTREGLRQ TEMNTLFNAA
QAYMNVLSDT ATLELQRNNV EVLEEQLRQT RDRFNVGEVT RTDVAQAEAR LAGARSQVSA
AEAALRASIG IFRQIVGVEP RQLAPGRPLD RYVPASLDQA ILIGLKEHPQ ILASLHAVDV
AELQVKVNEG ALYPQAQITG AVQQRYDQQF PGDNGVTASI VGRVNIPLYQ GGAEYAAIRQ
AKENVGRARL VADQDRDTIR ASIVRTWGNL EASKAQVIAS QAQVQANEVA LNGVREEARV
GQRTTLDVLN AQQELLSARV ALIRAQRDRV VNSYDVVQAV GRLTVRFTSL PVTPYSAREH
LDQVRDLWFG LRTPDGR
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