| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4694 |
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| Symbol | |
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| ID | 5832142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5248521 |
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| End bp | 5251241 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641370489 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001642133 |
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| Protein GI | 163854090 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.146741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA AGACCTTCGA CCCCGCCGCC GTCGAGGCGC GCGTCTCCGC GGCCTGGGAA
GAGGGCCAGG CCTTCCGCGC CGGCCGCCCC GAGCGGGCGG GCGCCGAGCC GTTCAGCATC
GTGATCCCGC CGCCGAACGT GACGGGCTCG CTGCATATGG GCCACGCGCT CAACAACACG
ATCCAGGATA TCCTCGTCCG CTTCGAGCGG ATGCGGGGCA AGGACGTGCT GTGGCAGCCG
GGCACGGACC ACGCCGGCAT CGCCACGCAG ATGGTGGTCG AGCGCAAGCT GATGGAGACG
CAGCAGCCGG GCCGCCGCGA GTTGGGACGC GAGGAATTCC TGCGCCGGGT CTGGGCCTGG
AAGGAGGAAT CCGGCGGCAC GATCATCGGC CAGCTCAAGC GGCTCGGTGC CTCCTGCGAC
TGGTCGCGGG AGCGCTTCAC CATGGATGAG GGCCTGAGCC GCGCCGTGCT CAAGACCTTC
GTCGATCTGC ACGCGCAGGG GCTGATCTAC CGCGATAAGC GTCTCGTGAA CTGGGACCCG
AAGTTCCAGA CCGCGATCTC GGACCTCGAA GTCCAGCAGA TCGAGGTGAA GGGCCATCTC
TGGCACTTTG ACTACCCCGT CGTGGACGAG GCCGGCACGC CGACCGGCGC GATCATCACC
GTGGCGACGA CCCGCCCCGA AACGATGCTC GGCGACACGG CGGTCGCCGT CCATCCGGAC
GACGAGCGCT ACCGCGACCT CGTCGGACAG CGCGTGCGCC TGCCCTTGGT CAACCGGCTG
ATCCCGATCG TCGCCGACGC CTATTCCGAT CCGGAGAAGG GCACCGGCGC GGTCAAGATC
ACCCCGGCCC ACGACTTCAA CGACTTCGAG GTCGGACGCC GCAACGGTTG CCGCCCGATC
AACGTCCTCG ATGCCGAGGC GCGCATCCAG ATCGCCGGCA ACGCCGATTT CCTCGACGGC
GCCGAGCCGG AGGACGCGGC GCTGGCGCTC GACGGCCTCG ACCGGTTCGA GGCCCGCAAG
CGCGTCATCG CCCTGATGGA GGAGCGCGGC CTGCTGCGTC TGGTCGAGCC CAACACCCAC
GCGGTGCCGC ATGGCGATCG TTCGGGCGTG GTGATCGAGC CTTACCTGAC CGACCAGTGG
TACGTGAACG TCAAGCCGCT GGCCGAGCGC GCCCTCCAGG CAGTGCGCGA CGGGCAGACC
CGCTTCGTCC CGGACAACTA CGAAAAGATC TTCTTCCAGT GGCTGGAGAA CATCGAGCCG
TGGTGCGTCT CGCGCCAGCT CTGGTGGGGC CACCAGATCC CGGTCTGGTA CGATGCCGAG
GGTGGCATCT TCGTCGCCGA GAGCGAGGCG GACGCGGTCG CGCAGGCGAA AGCCAAGCAC
GGCCGTGAGG TCGCCCTGAC CCGCGATCCC GACGTGCTCG ACACGTGGTT CTCCTCCGCG
CTCTGGCCGT TCTCGACCCT CGGCTGGCCG GACAAGACGC CGGAACTGGC CCGCTTCTAC
CCCACCAACA CCCTGGTCAC GGGCAAGGAC ATCATCTTCT TCTGGGTCGC CCGGATGATG
ATGATGGGTC TGCACCTCAC CGATCAGGCG CCGTTCGAGA CCGTCTACCT GCACACCCTC
GTCCGCGACG AGAAGGGTGC GAAGATGTCG AAGTCGAAGG GCAACGTGGT CGATCCGGTC
GATCTCATCG ACCGTTTCGG CGCCGACGCG CTGCGCTTCA CGCTGGCCGC GCTCGCCGCC
CCCGGCCGCG ACATCAAGCT CGGGCCGCAG CGGGTCGAGG GCTACCGCAA CTTCGCGACC
AAGCTCTGGA ACGCGGCGCG CTTTGCCGAG ATGAACGGCT GCGAACTCAA GGCCGATTTC
CGGCCCGAGG CCGTGCGCGA GACGCTCAAC GCCTGGGCGC TCACCGAGGC CGCCAAGGCG
GTGGCGGAGG TGGCGCAGGG CATCACGGTC TACCGCTTCA ACGATGCGGC GGCCGCGGCC
TACCGCTTCG TCTGGAACGT GTTCTGCGAC TGGTATCTCG AACTCGCCAA GCCGGTGCTT
CAGGGCGAGG GCGTCGATCC GGCGGCACGG GCCGAGACAC AGGCGACGGT CGCCTTCCTG
ATCGACCAGA TCGCCAAACT GCTGCACCCG TTCATGCCCT TCCTCACGGA GGAGCTGTGG
GCGATCAAGG GGCAGGTGCT GCCGAAACAA CGCGGCCTGC TCGCGCTCGA ATCCTGGCCC
GAGCTCTCGG CCTATACGAA CAGTGAGGCC GAGGAAGAGA TCGGCTGGCT GGTCGATCTG
ATCTCCGAGG TCCGCTCGGC CCGCTCCGAG ACCAACGTGC CCGCCGGCGC TCAGGTGCCG
CTGGTGCTGG TGGGCGCCGA TGAGGGCGTC CGTGCTCGGG TCGAGCGTTG GAGCGAGACG
CTGACCCGCC TCGCCCGCCT GTCCGAGATC GGTTTCGCCG ACGCCGCGCC GAAGAACGCC
GTCCAGCTCC TCGTGCGGGG CAGCGTGGCC GCACTTCCGC TCGAGGGCAT CGTCGATCTC
GCGGCTGAGG TCGCGCGGCT GAAGAAGGAG GCGGGCAAGG CGCGGGCCGA GATCGGCAAG
ATCGACGGCA AGCTCGGCAA CGCCGACTTT CTCGCCCGCG CGCCGGAAGA GGTGGTAGAC
GAGCAGCGCG AGCGCCGCGA CGCGGAGGCG GCCCGGCTCG TCAAGATCGA GGAAGCTTTG
GTCCGGCTCA GCGAGGCATG A
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| Protein sequence | MMDKTFDPAA VEARVSAAWE EGQAFRAGRP ERAGAEPFSI VIPPPNVTGS LHMGHALNNT
IQDILVRFER MRGKDVLWQP GTDHAGIATQ MVVERKLMET QQPGRRELGR EEFLRRVWAW
KEESGGTIIG QLKRLGASCD WSRERFTMDE GLSRAVLKTF VDLHAQGLIY RDKRLVNWDP
KFQTAISDLE VQQIEVKGHL WHFDYPVVDE AGTPTGAIIT VATTRPETML GDTAVAVHPD
DERYRDLVGQ RVRLPLVNRL IPIVADAYSD PEKGTGAVKI TPAHDFNDFE VGRRNGCRPI
NVLDAEARIQ IAGNADFLDG AEPEDAALAL DGLDRFEARK RVIALMEERG LLRLVEPNTH
AVPHGDRSGV VIEPYLTDQW YVNVKPLAER ALQAVRDGQT RFVPDNYEKI FFQWLENIEP
WCVSRQLWWG HQIPVWYDAE GGIFVAESEA DAVAQAKAKH GREVALTRDP DVLDTWFSSA
LWPFSTLGWP DKTPELARFY PTNTLVTGKD IIFFWVARMM MMGLHLTDQA PFETVYLHTL
VRDEKGAKMS KSKGNVVDPV DLIDRFGADA LRFTLAALAA PGRDIKLGPQ RVEGYRNFAT
KLWNAARFAE MNGCELKADF RPEAVRETLN AWALTEAAKA VAEVAQGITV YRFNDAAAAA
YRFVWNVFCD WYLELAKPVL QGEGVDPAAR AETQATVAFL IDQIAKLLHP FMPFLTEELW
AIKGQVLPKQ RGLLALESWP ELSAYTNSEA EEEIGWLVDL ISEVRSARSE TNVPAGAQVP
LVLVGADEGV RARVERWSET LTRLARLSEI GFADAAPKNA VQLLVRGSVA ALPLEGIVDL
AAEVARLKKE AGKARAEIGK IDGKLGNADF LARAPEEVVD EQRERRDAEA ARLVKIEEAL
VRLSEA
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