| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4616 |
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| Symbol | |
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| ID | 5832684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5158901 |
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| End bp | 5161840 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641370410 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_001642055 |
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| Protein GI | 163854012 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter
[TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.641343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.000524948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGTCCA ACGCTTTTCT CGCCGCCGCC GCGATCCTCC CCTTCGCGGG CTCCGTGCTC
ACGGGCGCCC TGCCGAGCCA TGCGCGCACC GCCGCGGCCG TGCTCGCCGG GTTCGTGACC
CTGGCCAGCC TCGGCTGCAT CCTCGCGCTC ACGCCGCAAC TGGCCGAGGG CGGCACCGTC
GTCCATGCGG TCGAGTGGCT GCCGAGCCTC GGCGTCAACC TCGTCCTGCG ACTCGACGGG
CTCGCCTGGC TGTTCGCGGT GCTGGTGCTC GCCATCGGCG CGCTGGTGGT GCTCTACGCG
CGCTACTACA TGGCCGCCGC CGACCCGGTG CCGCGGCTAT TCTCCTATTT TCTTGCTTTC
GTCGGTGCGA TGCTCGGCAT CGTTCTCTCC GGCAACCTGA TCCAGCTCGT CCTGTTCTGG
GAATTGACGA GCATCGTCTC GTTCCTGCTG ATCGGCTACT GGTACGACAA CGCTGCGGCC
CGTGACGGCG CGCGGATGTC GCTGACCATC ACAGCGGCGG GCGGCCTGTG CCTCTTGGTC
GGAACGGTGC TGATCGGACG CATCGTCGGC AGCTACGATC TGGCCACCGT CCTGGCCTCG
GGCGATACGA TCCGCAACAG CCCGCTCTAC CTGCCGGCCC TGGTGCTGGT TCTGGCGGGC
GCGCTCACCA AGTCGGCGCA GTTCCCGTTC CACATCTGGC TGCCGCGGGC GATGGCGGCG
CCGACGCCGA TCAGCGCCTA CCTGCACTCG GCCACCATGG TGAAGGCCGG CATCTTCCTG
ATGATCCGCC TGTGGCCGGT GCTCGCGGGC ACCGACGCGT GGTACTGGAT CGTCGGCAGC
GCCGGCATGG CGACCCTGCT GATCGGCTCG TGGAGCGCGA TCTTCCAGCA CGACCTGAAG
GGTCTGCTCG CCTACTCGAC CATCAGCCAT CTCGGGCTGA TCACGCTGCT GCTCGGCCTC
AACTCGCCGC TCGCCGTGGT CGCCGCGATC TTCCACACGG TGAACCACGC GACCTTCAAG
GCCTCGCTGT TCATGGCGGT GGGCATCATC GACCACGAGA CCGGCACGCG CGACATGCGC
CGCCTCTCCG GCCTGTGGCG GGCGATGCCC TATACCGGCA CGCTCGCCAT GGTCGCCGCC
GCGGCGATGG CCGGCGTGCC GTTGCTCAAC GGCTTCCTCT CGAAGGAGAT GTTCCTCTCC
GAGGCGGTCG ACAACATGGG CGACCACCCG ATCCATATCG CCCTGCCGGT GCTGGCGACG
CTGGCCAGCG CCTTCACCAT GCTCTACTCG CTGCGCTTCA TCCGCCAGAC CTTCTTCGGC
CCGCCCCCGC ACGACCTGCC GAAGACGCCG CACGAGCCGG TGCGGTGGAT GCGCATCCCG
ATCGAGATGC TGGTGCTCGC CTGCATCGCC ATCGGCCTCG TCCCGAACCT CACCATCGGC
CCGGCCCTGG AGCGGGCGGT GAGCGCGGTG TTCGGCGCGG AGACCCCGAC CTACAGCCTC
GCGATCTGGC ACGGCTTCAA CGCACCGCTG GCGCTCAGCA TGATCGCCCT CGTCGGCGGC
GTGCTGCTCT ACGTCCTGTT CGGAAAGCGC ATCAACACCA ACCCCCGCGG CGGCCCGTGG
CTGATGGACC GCCTCGACGG CGGCTGGGTG TTCGAGCGCG TAATGACCGG GCTGACGAAG
GGCGCCCGCC TGCTGGAACG GGCCTTCGGC GCCGAGCGGC TCCAGCCGCA ATTGCGCATC
CTGTTCCTCG CCGCCCTGCT CGCCGCGCTG GCGACCGGCG TCGCCCGCGG GCTCGACCTC
TTCGCGCTCG GCCGGCTCAC GCCGTTCGAT CCCGCCTTCG CGCTGATGTG GCTCGTCGGC
GGCGCCTGCG CGATCGGCGC GGCGGAACGG GCGAAGTATC ATCGCCTCTC GGCCACGATC
TTCGTCGGCG GGGCCGGGCT CGTCAGCAGC CTGACCTTCC TCTGGCTCTC GGCGCCGGAT
CTGGCGGTGA CGCAGATCCT CGTCGAGATC GTCACCACCG TCATGCTGCT GCTGGGCCTG
CGCTGGCTGC CCAAGCGCGA CCGGGCGATT CCCGCGCCCG CCGCCGAGAA GGCGCGGGCC
CGCCGCCGCC GTCTCGTCGA TCTCTGCATC GCCAGCTTTG CCGGGCTGGG GCTCGCCGGC
CTCGCCTACG CCGTGATGAC CCGCCCGGCC GGCGACGGCA TCGCGCGCTG GTTCATCGAG
GAGGCCTATC CGCAGGCAGG CGGGCGCAAT GTCGTCAACG TGCTGCTGGT CGATTTCCGC
GCCTTCGACA CGCTGGGCGA GATCTCGGTG CTCGGCATCG TCGGCCTCAC GGTGTTCGCG
CTGCTGCGCC GCTTCCGCCC GGCCCCGGAC AGCCTGGAGC GTCCCAAGCA GCAGCACCAC
CACGACGCCT ACGACCGCGC CCGCGAGGGC CGCAAACCCG GCGACACCAC CGCCGACGCC
CTGATGGTGC CGCGGGTGGT GATGACGTGG CTGTTCCCGT TCATCGTTCT GCTGTCGCTG
CACCTGTTCC TGCGCGGCCA CGACCTGCCC GGCGGCGGCT TCGCGGCGGG CATCGCGCTC
ACCATCGCCT TCATCCTGCA ATACATGGCC TGCGGCGCGC GGTGGGTGGA GGAGCGCCTG
CGCATCCAGC CGATCTCGTG GATCGGTCTC GGCCTGTTGA TCGCGGTGGG CGCCGGAGCG
GCCTCGTGGG CGTTCGGGCG GCCCTTCCTC ACCGCCTACT TCGCCTATTG GGAGCTGCCA
CTGCTCGGCA AGGTCCCGGC GGCGAGCGCC CTGGTGTTCG ATCTCGGGAT CATGGTCCTG
GTGGTCGGCG CGAGCGCGCT GATGCTGGTG GCGCTCGCCC ACCAATCCCT GCGCCGCACC
CGCAGCGCGG AGGCGGAGGC CGAACTGGAT GCCGAACAGG CCGGCGAGGA GACGGCGTAA
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| Protein sequence | MSSNAFLAAA AILPFAGSVL TGALPSHART AAAVLAGFVT LASLGCILAL TPQLAEGGTV
VHAVEWLPSL GVNLVLRLDG LAWLFAVLVL AIGALVVLYA RYYMAAADPV PRLFSYFLAF
VGAMLGIVLS GNLIQLVLFW ELTSIVSFLL IGYWYDNAAA RDGARMSLTI TAAGGLCLLV
GTVLIGRIVG SYDLATVLAS GDTIRNSPLY LPALVLVLAG ALTKSAQFPF HIWLPRAMAA
PTPISAYLHS ATMVKAGIFL MIRLWPVLAG TDAWYWIVGS AGMATLLIGS WSAIFQHDLK
GLLAYSTISH LGLITLLLGL NSPLAVVAAI FHTVNHATFK ASLFMAVGII DHETGTRDMR
RLSGLWRAMP YTGTLAMVAA AAMAGVPLLN GFLSKEMFLS EAVDNMGDHP IHIALPVLAT
LASAFTMLYS LRFIRQTFFG PPPHDLPKTP HEPVRWMRIP IEMLVLACIA IGLVPNLTIG
PALERAVSAV FGAETPTYSL AIWHGFNAPL ALSMIALVGG VLLYVLFGKR INTNPRGGPW
LMDRLDGGWV FERVMTGLTK GARLLERAFG AERLQPQLRI LFLAALLAAL ATGVARGLDL
FALGRLTPFD PAFALMWLVG GACAIGAAER AKYHRLSATI FVGGAGLVSS LTFLWLSAPD
LAVTQILVEI VTTVMLLLGL RWLPKRDRAI PAPAAEKARA RRRRLVDLCI ASFAGLGLAG
LAYAVMTRPA GDGIARWFIE EAYPQAGGRN VVNVLLVDFR AFDTLGEISV LGIVGLTVFA
LLRRFRPAPD SLERPKQQHH HDAYDRAREG RKPGDTTADA LMVPRVVMTW LFPFIVLLSL
HLFLRGHDLP GGGFAAGIAL TIAFILQYMA CGARWVEERL RIQPISWIGL GLLIAVGAGA
ASWAFGRPFL TAYFAYWELP LLGKVPAASA LVFDLGIMVL VVGASALMLV ALAHQSLRRT
RSAEAEAELD AEQAGEETA
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