Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4600 |
Symbol | |
ID | 5834210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 5140306 |
End bp | 5142009 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641370394 |
Product | thiamine pyrophosphate protein |
Protein accession | YP_001642039 |
Protein GI | 163853996 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0879686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAGA GCCCAGACGC CGCCCTCCCC GCCCGAAGCC GCGGGCGGAA CGCCGCCCAG GCGCTCGTGG ACCAACTCGC GGCCAACGGC GTCACCCACG TCTTCGCAGT GCCGGGCGAG AGCTACCTGC CGGTGCTCGA TGCGCTCTAC GAATCGGGCA TCGCCCTCAC CGTCTGCCGC CAGGAGGGCG GCGCGGCGAT GATGGCGGAA GCGCACGGCA AGGCGACGGG GCGGCCCGGC ATCTGCTTTG TCACCCGCGG TCCCGGCGCC ACCAACGCCT CGGCCGGCAT TCACATCGCC CAGCAGGATT CAACGCCGAT GATCCTGTTC GTCGGCCAGA TCGAGCGGGG TCTGCGCGAC CGCGAGGCGT GGCAGGAGGT CGATTACCGC GCCGCCTTCG GGCCGATCGC GAAATGGGCC ACCGAGATCG AGACCGGCGC GCGGATGCCG GAATACGTCT CGCGGGCCTT CCACACCGCC ACCGGCGGCC GGCCGGGCCC GGTGGTGGTG GCCCTGCCGA AAGACATGCT GAAGGACGCC GCGGAAGGGC CGCTGGCCCC GCCCTTCCAA GCCGTCGAGG CCGCGCCCGG CGCGGAGGAT CTCGCGTCCC TCGCCGCCCT GCTGGCGGAG GCCAAAAGCC CCTTCCTGGT GCTCGGCGGC AGCCGCTGGA CCGAGCAGGC CTATGCCGAT ATCCGCCGCT TCACTGAGGC CTTCGATCTG CCGGTGGCCA CGAGCTACCG CCGCCTGCCG CTGTTCGATC CGCTGCATCC GAACTACGCA GGCGATCTCG GGCTTGCCGC CAACCCGAAG CTGGTGGCGC GGGCCAAGGC CGCCGACCTG ATGATCGTGC TCGGCGGCCG CCTCGGCGAG GTCGCGAGCC AGACCTATTC GCTCCTCGAC ATCCCGGCCC CCCGCACCCG CCTCGTCCAC ATCCATCCCG GAGCGGAGGA ACTCGGCCGG GTCTACGTTC CGCATCTCGG CATCACCGCC GCGCCGGCCC GGATGGCGGC GGCTCTGGCG CGGCTCGATG CGCCGGCCTC CGTCCCGTGG GCGGCCGAGA CCCGCGCGGC CCATGACGCA TATCTGGCGT GGTCGCAGAC CCCGACGCCG CAGCCCGGCC CGGTCAATCT CGGGCAGGTG ATGGTGCATT TGCGCGAGGC GCTGCCGGAG GACGCGATCC TGTGCAACGG CGCGGGCAAC TACGCCGCCT GGATCCACCG CTTCTACCGC TTCCGCCGCC TTGCCACCCA CATGGCGCCG ACCTCCGGCT CGATGGGCTA CGGCGTGCCG GCGGCTGTGG CGATGAAGCG GATCTTTCCC GACCGCACGG TGATCTCGAT CAACGGCGAC GGCGACTTCC TGATGAACGG CCAGGAATTC GCGACCGCCG TGCAGTACGG CCTGAACATC GTCTGCATCG TCGCCGACAA TGCGAGCTAC GGCACGATCC GCATGCATCA GGAACGCGAT TTTCCGGGCC GTGTCCTCGC CACCGACCTC GTGAACCCGG ACTTTGCCGC CTATGCTCGC GCCTTCGGCG GCGTCGGCTT CACCGTGGAG CGGACCGAGG ATTTTCCGGC GGCGTTGGAG GAGGCCCTGG CGGCGCGGCG CCCGGCGATC ATCCACGTGA AGTTCTCGGT CGATGCGATC ACGCCGGGCC TGAGCCTCAC GGCGATCCGC GAGAAGGCGC TGGCGGGCGA TTGA
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Protein sequence | MSQSPDAALP ARSRGRNAAQ ALVDQLAANG VTHVFAVPGE SYLPVLDALY ESGIALTVCR QEGGAAMMAE AHGKATGRPG ICFVTRGPGA TNASAGIHIA QQDSTPMILF VGQIERGLRD REAWQEVDYR AAFGPIAKWA TEIETGARMP EYVSRAFHTA TGGRPGPVVV ALPKDMLKDA AEGPLAPPFQ AVEAAPGAED LASLAALLAE AKSPFLVLGG SRWTEQAYAD IRRFTEAFDL PVATSYRRLP LFDPLHPNYA GDLGLAANPK LVARAKAADL MIVLGGRLGE VASQTYSLLD IPAPRTRLVH IHPGAEELGR VYVPHLGITA APARMAAALA RLDAPASVPW AAETRAAHDA YLAWSQTPTP QPGPVNLGQV MVHLREALPE DAILCNGAGN YAAWIHRFYR FRRLATHMAP TSGSMGYGVP AAVAMKRIFP DRTVISINGD GDFLMNGQEF ATAVQYGLNI VCIVADNASY GTIRMHQERD FPGRVLATDL VNPDFAAYAR AFGGVGFTVE RTEDFPAALE EALAARRPAI IHVKFSVDAI TPGLSLTAIR EKALAGD
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