| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4508 |
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| Symbol | |
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| ID | 5834398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5031376 |
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| End bp | 5034585 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641370301 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001641947 |
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| Protein GI | 163853904 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.229715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTCG CCCATTTCTT CGTCGACCGG CCGATCTTCG CCTCGGTCAC GTCGATCATC
TTCCTGATCG TCGGCTTCGT CGCCTACGAG AAGCTGCCGG TCTCGCAATA TCCCGAGATC
GTGCCGCCGA CCGTGACCGT GCGCGCCAGC TTCCCCGGCG CCAACGCCGA GACGGTGGCC
GCCACGATCG CGACGCCGCT GGAGCAGGAG ATCAACGGCG TCGACAACAT GCTCTACATG
ACGTCGTTGT CGACCAACGA CGGCGCGATG CTGCTGACCG TGACCTTCAA GGTCGGCACC
AACCTCGATA TCGCCAACGT GCTCGTCCAG AACCGGCTCT CGGTGGCGCA GCCGCGCCTG
CCGCCGGACG TGCGCAACCT CGGCGTCACC GTGCGCAAGG CCTCGCCCGA CCTGATGCTG
GTCGTGCACC TGCTCTCGCC CAAGCGCACC TACGACCAGA ACTATCTGGC CAACTACATC
TATCTCAACA TCCGCGACGA GCTGCTGCGC CTCGACGGCG TCGGCGACAT CTCGATCTTC
GGCGGCAACG AGTATGCCGA GCGGGTCTGG ATCGATCCGC AGAAGATGGC CGCCTACGGC
CTGACCACCA CCGACGTGAC GAGCGCGCTG CAGGAGCAGA ACGTGCAGGT CGCGGCCGGC
CAGCTCAACG GCCCGCCCGC CGCGCCGGGC GCCGCCTTCC AGCTCGTGGT GCAGTCGCAA
GGGCGCTTCC AGTCGCCGGA GCAGTTCGCC GACGTCATCG TCAAGGCGAA TGACGGGCGC
CTCGTGCGCG TGCGCGACAT CGCCCGCGTC GAGATGGGCC AGAAGGACTA CACGACGAAC
TCCTTCCTCA ACGACACGCC AGCAGTCGGC ATCGGCGCCT TCCAGCGGCC GGGCACCAAC
GCGCTCGAGG CCGCGGAATC GGTCAAGGCG ACGATGGAGC AGTTGAAGAA GAACTTCCCG
CCGGACGTCG AGTACCGCAT CGCCTACAAC CCGACGGAGT TCATCGAGGA ATCGATCCAC
GAGGTCTACA AGACCCTTTT CGAGGCGGTC CTCCTCGTCG TCATCGTGGT GCTCGTCTTC
CTCCAGAGCT GGCGCACGGC GCTGATCCCG GTGATCGCGA TTCCGGTGTC GCTGGTCGGC
ACCTTCGCGG TGATGTCGGC GCTGGGCTTC TCGCTCAACA ACCTCACCCT GTTCGGTCTC
GTGCTCGCCA TCGGCATCGT GGTCGACGAC GCGATCGTCG TGGTGGAGAA CGTCGAGCGC
AACATGGCCG AGGGGCTCTC GGCCGGCGAG GCGGCCCACA AGACCATGGA CGAGGTGGGC
GGGGCGGTCA TCGCCATCGC CCTCGTGCTC GCGGCGGTGT TCATCCCGAC CGCCTTCATC
CCCGGCATCT CGGGCCAGTT CTACAAGCAG TTCGCGCTCA CCATCGCGGC CTCGACCATC
ATCTCGGCCT TCAACTCGCT CACCCTGTCG CCGGCACTCT GCAAACTGCT GCTGAAGCCG
CACCACGAGC ACAAGCCGCC GAAATTCTTC CTCACCCGCT TCCTCAACTG GCTGGCGCAC
CTGTTCAACC GCGGCTTCGA CGCGCTGTCG AACGGCTACG CCCACTCGAT CCGCTTCCTG
ACGGGAACGG CCATCGGCGT GATCGCCATG CTGATCCTCT ATGCCGGCGT GATCGCGGGC
ACGCTGCACC TCGCCCGGAC GACGCCCACG GGCTTCATCC CGGACCAGGA TCAGGGCTAC
CTCATCGGCG TCGTGCAGTT GCCCGCGGGC TCCTCGCTCG ACCGCACCAC CGATGCGGTG
AACCGGGCCG CCAAGATCGC CCGCGGCGTC GACGGCATCA CCAACACTGT CATCATCGCG
GGCTTCGACG GCGCGACCTT CACCAACACC ACCAACGCGG CGGTGATGTT CCTCACCCTC
AAGGGCGCCA AGGAACGGGC CGCGCAGGGC CGGAGCGCGG CCGTCATCAC CGGCGACGTG
CTGAAGGCGA CGGCGGGCAT CCAGGAAGCG CGCATCATCG TCATCCCGCC GCCGCCGGTG
CGCGGCCTCG GCCAGGGCGG CGGCTTCAAG ATGCAGATCG AGAGCCGCCA ATCCTCCGAG
ATCGGACCGC TGCTCGCGGC CGCCGGCGAG GTGATCGGAC AGGCCAACCA GAGCAAGGAT
GTGACGCGGG TCTTCACGAC CTTCGGCAAC GACACGCCGC AGCTCTACCT CGACATCGAC
CGCACCATCG CGCGCATGCT CAACGTGCCG CTCGCCAACG TCTTCTCGAC CGTGCAGACG
GCGTTGGGCG GCGCTTACGT CAACGACTTC AACACCTTGG GCCGCATCTA TCAGGTGCGC
GTGCAGGGAG ACGCGGTCTA TCGCATGTCG CGCCGGGACA TCGAACAGCT CAAGGTGCGC
TCCTCGACCG GCGCCCTGGT GCCGATGGGC ACGCTCGCCT CGATCCGCGA CATCGCCGGC
CCGCAGATCG TGCAGCGGTT CAACCTGTAC TACTCGGTGC CGCTGCAGGG CGTGGCGCAG
CCCGGCGTCT CGACCGGCCA GGCGCTCGAC ACCATGGAGG AGATCGCCAA GCGGGCCCTG
CCCGAGGGCT ATTCCTACGA CTGGACCGAG ATCGCCTTCC AGCAGAAGGC GGCGGGCGAC
ACGGCGATCT ACGTCTTCGC GCTGGGCGTG CTCCTGGTCT TCCTCGTGCT CGCGGCGCAG
TACGAATCCT GGGCGCTGCC GCTGGCGATC CTGCTGGTGG TGCCGACAGG CGTGCTCGCC
GCCCTGTTCG GGGTGCAGTT GCGAGGGCAG GACAACAACA TCCTGACCCA GATCGGACTG
ATCGTGCTCA TCGGTCTGGC CGCCAAGAAC GCGATCCTGA TCGTGGAGTT CGCCCACGAC
ATCGAGAACA GCGAGAACAA GGGCCCGGTG GATGCCGCGG TCCAGGCCTG CCGCCTGCGC
CTGCGCCCGA TCCTGATGAC GGCCTTCGCC TTCATCCTCG GCGTGCTTCC GCTGGTGATC
GCCACGGGGC CCGGCGCCGA GATGCGCCAG GCGCTCGGCA CGGCGGTGTT CTTCGGGATG
ATCGGCGCGA CCTTCTTCGG TCTGTTCCTG ACGCCGGTCT TCTACGTGGT GATCCGCAAG
GCGGTGATCT GGATCGGAAG GAAGCGCGGC AAGGACACGC ATGGCGGCGA CGGGCATGGC
GCGCCGCACG GAGCCCCGGC CCACGGCTGA
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| Protein sequence | MRFAHFFVDR PIFASVTSII FLIVGFVAYE KLPVSQYPEI VPPTVTVRAS FPGANAETVA
ATIATPLEQE INGVDNMLYM TSLSTNDGAM LLTVTFKVGT NLDIANVLVQ NRLSVAQPRL
PPDVRNLGVT VRKASPDLML VVHLLSPKRT YDQNYLANYI YLNIRDELLR LDGVGDISIF
GGNEYAERVW IDPQKMAAYG LTTTDVTSAL QEQNVQVAAG QLNGPPAAPG AAFQLVVQSQ
GRFQSPEQFA DVIVKANDGR LVRVRDIARV EMGQKDYTTN SFLNDTPAVG IGAFQRPGTN
ALEAAESVKA TMEQLKKNFP PDVEYRIAYN PTEFIEESIH EVYKTLFEAV LLVVIVVLVF
LQSWRTALIP VIAIPVSLVG TFAVMSALGF SLNNLTLFGL VLAIGIVVDD AIVVVENVER
NMAEGLSAGE AAHKTMDEVG GAVIAIALVL AAVFIPTAFI PGISGQFYKQ FALTIAASTI
ISAFNSLTLS PALCKLLLKP HHEHKPPKFF LTRFLNWLAH LFNRGFDALS NGYAHSIRFL
TGTAIGVIAM LILYAGVIAG TLHLARTTPT GFIPDQDQGY LIGVVQLPAG SSLDRTTDAV
NRAAKIARGV DGITNTVIIA GFDGATFTNT TNAAVMFLTL KGAKERAAQG RSAAVITGDV
LKATAGIQEA RIIVIPPPPV RGLGQGGGFK MQIESRQSSE IGPLLAAAGE VIGQANQSKD
VTRVFTTFGN DTPQLYLDID RTIARMLNVP LANVFSTVQT ALGGAYVNDF NTLGRIYQVR
VQGDAVYRMS RRDIEQLKVR SSTGALVPMG TLASIRDIAG PQIVQRFNLY YSVPLQGVAQ
PGVSTGQALD TMEEIAKRAL PEGYSYDWTE IAFQQKAAGD TAIYVFALGV LLVFLVLAAQ
YESWALPLAI LLVVPTGVLA ALFGVQLRGQ DNNILTQIGL IVLIGLAAKN AILIVEFAHD
IENSENKGPV DAAVQACRLR LRPILMTAFA FILGVLPLVI ATGPGAEMRQ ALGTAVFFGM
IGATFFGLFL TPVFYVVIRK AVIWIGRKRG KDTHGGDGHG APHGAPAHG
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