Gene Mext_4500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4500 
Symbol 
ID5832021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5018815 
End bp5020674 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content68% 
IMG OID641370293 
Productglycoside hydrolase 15-related 
Protein accessionYP_001641939 
Protein GI163853896 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3387] Glucoamylase and related glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAC GGATCGAGGA TTACGCCCTG ATCGGCGACG GGCGCACCGC GGCCCTAGTC 
GGGCGCGACG GCAGCATCGA CTGGCTGTGC ATGCCGCGCT TCGATGCCTC GGCCCTGTTC
GCGAGCCTTC TCGGAACGGA GGAGCACGGC TTCTGGAAGC TCGCTCCGGC GGCGGAGGGG
GCACAGCATT CCTGGCGCTA CCGCGGCGGC TCGCTGGTGC TGGAGACCAC GCACAAGACC
CATGAGGGAG AGGTCCGCGT CACCGACTTC ATGCCCGTCG GCGACGGCAG CCACGTGATC
CGTCTCGTCG AGGGGGTGCG CGGCCGGATG GCGATGCGGA TGGAACTGGC CGTGCGCTTC
GATTACGGCT CGGCGGTGCC CTGGGTGTCG CGCAGCGAAC TCGGGGATCT GCGCGCCATC
TCCGGGCCGC ACAAGGTGGT CCTGCGCACC AACGCGCCGA TGCGCGGCTC CGCCCACCAG
ACCACGGTCT CGGAATTCAC GGTCTACAAG GGCGACGCAG TCCGCTTCGT GCTGAGCTAC
GGCGCCTCGC ACGAAGACGA TCCTGCACCG ATCGAGCCGC GCCGCTGGCT CGACGACACC
AACCGTTTCT GGCGCGAGTG GTCGAGCCGC TGCACGCTCC AGACGCCTTG GGACGCCATC
CTGCGCCGCT CGCTCCTGAC GCTGAAGGCG CTGATCTACC AACCGACCGG CGGGATCGTC
GCCGCGCCCA CCACGTCGCT GCCGGAAGAA CTCGGCGGGG TGCGCAACTG GGACTACCGC
TTCTGCTGGC TGCGCGACTC CACCTTCACG CTGCTGGCGC TGATGGATTC AGGCTACATC
GAAGAGGCCC GCGCCTGGCG CGACTGGCTG ACCCGGGCGG TGGCCGGCAA CCCGGAGCAG
GCGCATATCC TCTACGGCAT TGCCGGCGAG CGGCTGTTGC CGGAGATCGA ACTCGATTGG
CTGCCCGGCT ACGAGGGTTC GCGGCCCGTG CGCGTCGGCA ACGCCGCGAT CGCCCAGTTC
CAGCTCGACG TCTACGGGGA GTTGTTCGAC GCCCTGTTCC AGGCCCGTGC CCGCGGCATG
GGGCAGAACA AGGACGGCCT GCGCGTCGGC CAAGCGATCA TCAAGCACCT CGAGACGGCG
TGGCGCCAGC CCGATGAGGG CATCTGGGAG GTGCGCGGCG GGCGGCGCCA CTTCGTCCAT
TCCAAGGTGA TGGCCTGGGT GGCCTTCGAC CGGGCGATCC GCAGCGTCGA GCTGATGGGC
GACGACGATC CGCACACCGT CGAAGCGCCG GTCGCGCACT GGAAGGCGAT CCGCGACGAG
ATCCACGCCG AGGTCTGTGC CAAGGGGTTC GACCCGGAGC TGAACAGCTT CGTCCAATCC
TACGGAAGCA AGGCGCTCGA TGCGAGCCTG CTGCTCATCG CGCATATGGG CTTCCTGCCC
CAGGACGATC CCCGCGTCGT CGGCACGGTG GCGGCCGTCG AATCGCATCT GATGCGCGAG
GGGTTCATCC TGCGCTACGA GACCGAAGGC CAGACCACCG ACGGCCTGCC CGGCAACGAG
GGTGCGTTCC TGCCCTGCAG CTTCTGGTAC GCCGACAATC TGATCGGCCT CGGCCGCTGC
GACGAGGCTC GCGAGCTGAT CGAGCGCCTG ATCGGTGTCT GCACCGATCT CGGATTGGTC
TCCGAAGAGT ACGACGTGCA CGCGAAACGG CTGGTGGGGA ACTTCCCTCA GGCGTTCACG
CATGTTGCAC TCGTCAACAC GATCCTCAAT TACAGCCGCG CGACCGGTCC TGCGAAGGAA
CGGGGCAGCG GCGCGGACGT ATCCGAGTCG AGGGTAGGCG AATCCATCGC AGCGCAGTAG
 
Protein sequence
MAGRIEDYAL IGDGRTAALV GRDGSIDWLC MPRFDASALF ASLLGTEEHG FWKLAPAAEG 
AQHSWRYRGG SLVLETTHKT HEGEVRVTDF MPVGDGSHVI RLVEGVRGRM AMRMELAVRF
DYGSAVPWVS RSELGDLRAI SGPHKVVLRT NAPMRGSAHQ TTVSEFTVYK GDAVRFVLSY
GASHEDDPAP IEPRRWLDDT NRFWREWSSR CTLQTPWDAI LRRSLLTLKA LIYQPTGGIV
AAPTTSLPEE LGGVRNWDYR FCWLRDSTFT LLALMDSGYI EEARAWRDWL TRAVAGNPEQ
AHILYGIAGE RLLPEIELDW LPGYEGSRPV RVGNAAIAQF QLDVYGELFD ALFQARARGM
GQNKDGLRVG QAIIKHLETA WRQPDEGIWE VRGGRRHFVH SKVMAWVAFD RAIRSVELMG
DDDPHTVEAP VAHWKAIRDE IHAEVCAKGF DPELNSFVQS YGSKALDASL LLIAHMGFLP
QDDPRVVGTV AAVESHLMRE GFILRYETEG QTTDGLPGNE GAFLPCSFWY ADNLIGLGRC
DEARELIERL IGVCTDLGLV SEEYDVHAKR LVGNFPQAFT HVALVNTILN YSRATGPAKE
RGSGADVSES RVGESIAAQ