Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4428 |
Symbol | |
ID | 5833462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4923301 |
End bp | 4925382 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641370221 |
Product | PAS sensor protein |
Protein accession | YP_001641867 |
Protein GI | 163853824 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.426756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCTGA GCATCGCCGC CGCGATGCTG GCGCTAATCC TGGTGTCGCT CCGCCGCCGC GAGCCCGTCG TGCCGGAATC CGACATGACG GAGGCGCTCC AGGACCGGCT CTGGCAGATC GCCGAGAGCG AGGAGCGCTA CCGGGTGCTG GTCGAGGCCA CCACCGAGGC CGTGGTTCAA CGGGACGGGC AGGGGCGGAT CACCTTCGCC AGCGCGGGGT TTGCCGCGCT GCTCGGCATG AAGCCGCTGG AGCTGATCGG CTCGACGCTG AGCCCGCAGG TGATCGAGCG CGGCGCGAGC GAGCAGCGCG CCGACGGCGT GCGGGTGGTC GAGGAGCGTC TGGTGCCGGT GGACGGGCTG CCGCGCTGGT TCTCCTTCAT CGAGATGCCG GTCTCCGGCA GCGTTGACGG TCCGAACTGG CTGCGGGCCG GCCAGGACGT CACCGCGCGC GTCGAGGCGG CGCGTGTCCT CGACGAGGCG AAAAGCCGGG CGGAGGCCGC CAACGTCGCC AAATCCCGCT TCCTCGCCAC CGTCAGCCAC GAACTGCGCA CGCCGTTGAA CGGCATTCTG GGGATGGCCG ACCTGCTGCT CGACACCCGG CTCGACCCCG AACAGCGCAC CTATGTCGAG GCGTTCCGCA CCAGCGGCAA GGCACTGCTC GGCCTCGTGG ACGGCATCCT CGATTTCTCC CGGATCGAGG CCGGCCGCCT CGATCTGGCC GCCGAACCCT TCGACGTCGC CGCCCTGGTC GAGGGCGTGG TCGAGCTGCT GGCGCCGCGC GCGCAGGACA AGGGCCTGGA AATCGCCCTC GACATCGCCG ACGACCTTGC CGCCCTGCGC GTGGGCGATG CCGACCGGGT GCGGCAGATC CTCGTGAATC TGGCCGGCAA CGCCATCAAG TTCACGCAAG CCGGCGGCGT CGGCGTCAGT CTCGCCCGGT CGGGGGAGGG GCAGGGGGAA GGGCTCGTCC TCACGGTCGA GGATACCGGG CCGGGCATTC CGGAGGAGCG CATCCCGATC CTGTTCGAGG AGTTCGAGCA GGGCGACGAC AGCGCGAGCC ACGAGGGCAC CGGCCTCGGT CTGGCCATCA CCCGCCGCCT CGTGGAGCGC ATGAACGGCA CGATCGAGGC GCGCTCGACG GTGGGGCGCG GCTCGACCTT CCGGGTCGTG CTGCCGCTGC CGGCGGCGGA GGGTGCGATG AGCCCCGAGA CACCGAGCCT CGCGCCGCGA AAGGTGCTGA TCGTGGCGGC CTCGCCGTAT CAGGCGCCGT TCCTGGCCCG GCGGCTCAGC CGCTCCGGGG CGGCGGCGGT GGTCGTGAAC AGCGCGGAGG CCGCCCTCGA TGCGCTGTCG GGCGTGGCCT TCGATGCGCT CATCGCCGAC CGTAGCCTCG GCGACGCCGC CGTGCGGCGG CTCGCGGCCG AGGCCGCCCG CTGCGGCGTG CGCTGCAGCC TGATCCTGCT CTCGCCCTTC GACCGGCGGG AATTCGGAGC CCCGAACGCG GCGGGCTTCG ACAGCTACCT GATCAAGCCG GTGCGCGCCC GCTCGCTGTT CGACCGCCTG CTGGAGCCGC GGCCCGCCCC GGCCCGCAGC CCGGCCGACG CGACGGCCAA GACTGGCACG AGCCAACCCG GCCCGCGCCA GCCCGCTCCG GTCAAGACTA CACCGGGCAA GACTGGATCA ATCCAGACCG CCGCGCGGGG CCGCAGGGTG CTGCTGGCAG AGGACAACCC GATCAACGCG CTGCTCGCCA CCAAGGCGCT GGAGCGGCTC GGCGCACAGG TGATCCACGC CCGCGACGGG CTCGAGGCTC TGGCGGCGGC GGAAGGGCAG GGGCCGTTCG ACCTCGCGCT GATCGACATC CGCATGCCCG GCCTCGACGG CCTGGAGACC GCCCGCCGCA TCCGCGCCCG CGAGGCCGAG ACCGGCGCGA GCCCGCTCCA CCTCGTGGCG CTCACCGCCA ATACCGGCCG CGAGGATGTC GACGCGGCCT CCGCGGCCGG GTTCGACGGC TTCCTGCCCA AGCCGCTGAA CCTGCGCGCC CTGCCGGCTC TGCTGGACCG CCGCCAAGAG GAGGCAGCTT GA
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Protein sequence | MGLSIAAAML ALILVSLRRR EPVVPESDMT EALQDRLWQI AESEERYRVL VEATTEAVVQ RDGQGRITFA SAGFAALLGM KPLELIGSTL SPQVIERGAS EQRADGVRVV EERLVPVDGL PRWFSFIEMP VSGSVDGPNW LRAGQDVTAR VEAARVLDEA KSRAEAANVA KSRFLATVSH ELRTPLNGIL GMADLLLDTR LDPEQRTYVE AFRTSGKALL GLVDGILDFS RIEAGRLDLA AEPFDVAALV EGVVELLAPR AQDKGLEIAL DIADDLAALR VGDADRVRQI LVNLAGNAIK FTQAGGVGVS LARSGEGQGE GLVLTVEDTG PGIPEERIPI LFEEFEQGDD SASHEGTGLG LAITRRLVER MNGTIEARST VGRGSTFRVV LPLPAAEGAM SPETPSLAPR KVLIVAASPY QAPFLARRLS RSGAAAVVVN SAEAALDALS GVAFDALIAD RSLGDAAVRR LAAEAARCGV RCSLILLSPF DRREFGAPNA AGFDSYLIKP VRARSLFDRL LEPRPAPARS PADATAKTGT SQPGPRQPAP VKTTPGKTGS IQTAARGRRV LLAEDNPINA LLATKALERL GAQVIHARDG LEALAAAEGQ GPFDLALIDI RMPGLDGLET ARRIRAREAE TGASPLHLVA LTANTGREDV DAASAAGFDG FLPKPLNLRA LPALLDRRQE EAA
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