| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4406 |
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| Symbol | |
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| ID | 5834743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4902926 |
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| End bp | 4905778 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641370199 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001641845 |
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| Protein GI | 163853802 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCA TCAAGGAAAT CGACTACGGC ACGCCGATCC GGCTCAATGA GCAGACGGTG
ACGCTGACCA TCGACGGCGA GAGCGTGACG GTGCCCGCGG GCACCTCGGT CATGGCCGCC
GCGATGCATA TGGGCACCAA GATCCCGAAG CTCTGCGCCA CGGATTCGCT GGAGCCGTTC
GGCTCCTGCC GGATGTGCCT CGTCGAGATC GACGGCCGCC GCGGCACGCC CGCCTCCTGC
ACCACCCCGG CCGAGAATGG CATGGTCGTG CACACGCAGA CCGACAAGCT GCATCGGCTG
CGCAAGGGCG TGATGGAGCT CTACATCTCC GACCACCCGC TCGACTGCCT GACCTGCGCC
GCCAACGGCG ATTGCGAGCT GCAAGATACT GCAGGTCAGG TCGGCCTGCG CGAGGTCCGC
TACGGCTATG ACGGCGACAA CCACGTCAAG CCGGCCTCCG ACCGCTACCT GCCCAAGGAC
GAGTCGAACC CCTACTTCAC CTACGACCCG TCGAAGTGCA TCGTCTGCAA CCGCTGCGTC
CGCGCCTGCG AGGAGACGCA GGGCACCTTC GCGCTGACCA TCGAGGGCCG CGGCTTCGAC
AGTCGCGTGG CGGCGGGCCC GACCAACTTC ATGCAGTCCG AATGCGTGTC CTGCGGCGCC
TGCGTCCAGG CCTGCCCGAC CGCGACGCTG CAGGAGAAGA CGATCCACCA ATACGGCCAG
CCGGACCATT CCGAGGTCAC GACCTGCGCC TATTGCGGCG TCGGCTGCGC CTTCAAGGCC
GAGATGCAGG GCGACAAGGT CGTCCGCATG GTGCCCTACA AGGGCGGCAA GGCGAACGAG
GGACATAGCT GCGTCAAGGG CCGCTTCGCC TACGGCTACG CCACCCACAA GGACCGCATC
ACCAAGCCGA TGATCCGCGC CAAGATCACG GATCCGTGGC GCGAGGTGTC GTGGGAGGAG
GCGATCAATC ACGCCGCCTC CGAGTTCAAG CGCATCCAGG CGACCTACGG CCGCGACTCG
GTCGGCGGCA TCACCTCGTC GCGCTGCACC AACGAGGAAG CCTACCTCGT CCAGAAGCTG
GTGCGCGCCG CCTTCGGCAA CAACAACGTC GATACCTGCG CCCGCGTCTG CCACTCGCCG
ACCGGCTACG GCCTGATGTC CACGCTCGGC ACCTCCGCCG GCACGCAGGA CTTCAAGTCG
GTCGAGGAAT CCGACGTGAT CCTCGTCATC GGCGCCAACC CGACCGACGG CCACCCCGTC
TTCGGCTCGC GGATGAAGAA GCGGCTGCGT GAGGGCGCCC GCCTCATCGT CGCCGACCCG
CGCAAGATCG ACCTCGTGAA GTCGCCCCAC ATCCGGGCCG AGCATCACCT GCCGCTCAAG
CCCGGCTCCA ACGTCGCCTT CATCAACGCC TTCGCCCACG TCATCGTCAC GGAAGGGCTG
ATCGCCGAGG ACTACGTCCG CGAGCGCTGC GATCTGGCCG AGTTCGAGTC CTGGGCCCGC
TTCATTGCCG AGGAGCGCAA CTCGCCGGAA GCCGCGCAGG CCATCACCGG CGTCGATCCA
CAGGAGATCC GCGCCGCGGC CCGGCTCTAC GCCACCGGCG GCAAGGCGGC GATCTACTAC
GGGCTCGGCG TGACCGAGCA CAGCCAGGGC TCGACCATGG TGATGGGCAT GGCCAACATC
GCCATGGCCA CCGGCAATAT CGGCATGGTG GGCGCCGGCG TGAACCCGCT GCGCGGCCAG
AACAACGTGC AGGGCTCCTG CGACATGGGC TCGTTCCCGC ACGAGCTGCC GGGCTACCGC
CACGTCTCGG ACGACGCCAC CCGCGAGAGC TTCGAGGCGA TCTGGGGGGC CAAGCTCGAC
AACGCGCCGG GCCTGCGCAT CACCAACATG CTGGACGAGG CCGTCGGCGG CAGCTTCAAG
GGCATGTACA TCCAGGGCGA GGACATCGCG CAGTCCGACC CCGACACCCA CCACGTCACC
TCCGGCCTCA AGGCCATGGA GTGCATCGTG ATCCAGGACC TGTTCCTGAA CGAGACCGCC
AAATACGCCC ACGTCTTCCT GCCGGGCGCT TCCTTCCTCG AGAAGGACGG CACCTTCACC
AATGCCGAGC GCCGCATCTC CCGCGTGCGC AAGGTGATGG CCCCGATGGG CGGCTACGGC
GATTGGGAGG GCACGGTGCT GCTCGCCAAC GCCCTGGGCT ACAAGATGGA GTACACCCAC
CCGTCCGAGA TCATGGACGA GATCGCGGCG CTCACCCCGA GCTTCGCCGG CGTCTCCTAT
GACAAGCTGG AGGAGCTGGG CTCGATCCAG TGGCCGTGCA ACGAGAAGGC GCCGCTCGGC
ACGCCGATGA TGCACGTCGA CCGGTTCGTG CGCGGCAAGG GCCGCTTCAT GATCACGGAA
TACGTGCCCA CCGACGAGCG GACCACGGGC AAGTTCCCGC TGATCCTCAC CACGGGCCGC
ATCCTCTCGC AGTACAATGT CGGCGCGCAG ACGCGGCGCA CCGAGAACTC CCGCTGGCAC
GAGGAAGACG TGCTGGAGAT CCACCCCTTC GACGCGGAGA TGCGCGGCAT CGTCGATGGC
GACCTCGTCG CCCTGGAGAG CCGCTCGGGC GACATCGCGC TGAAGGCCAA GGTGACCGAG
CGGATGCAGC CGGGGATCGT CTATACGACG TTCCACCACG CCAAGACCGG CGCCAACGTC
ATCACCACGG ACTATTCGGA CTGGGCGACC AACTGCCCCG AATACAAGGT GACGGCGGTG
CAGGTGCGGC GCACGAACCG GCCCTCGGAC TGGCAGGCGA AGTTCTACGA GGAGGACTTC
TCGCTCACCC GCATCGCCGA AGCGGCGGAA TAG
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| Protein sequence | MTLIKEIDYG TPIRLNEQTV TLTIDGESVT VPAGTSVMAA AMHMGTKIPK LCATDSLEPF
GSCRMCLVEI DGRRGTPASC TTPAENGMVV HTQTDKLHRL RKGVMELYIS DHPLDCLTCA
ANGDCELQDT AGQVGLREVR YGYDGDNHVK PASDRYLPKD ESNPYFTYDP SKCIVCNRCV
RACEETQGTF ALTIEGRGFD SRVAAGPTNF MQSECVSCGA CVQACPTATL QEKTIHQYGQ
PDHSEVTTCA YCGVGCAFKA EMQGDKVVRM VPYKGGKANE GHSCVKGRFA YGYATHKDRI
TKPMIRAKIT DPWREVSWEE AINHAASEFK RIQATYGRDS VGGITSSRCT NEEAYLVQKL
VRAAFGNNNV DTCARVCHSP TGYGLMSTLG TSAGTQDFKS VEESDVILVI GANPTDGHPV
FGSRMKKRLR EGARLIVADP RKIDLVKSPH IRAEHHLPLK PGSNVAFINA FAHVIVTEGL
IAEDYVRERC DLAEFESWAR FIAEERNSPE AAQAITGVDP QEIRAAARLY ATGGKAAIYY
GLGVTEHSQG STMVMGMANI AMATGNIGMV GAGVNPLRGQ NNVQGSCDMG SFPHELPGYR
HVSDDATRES FEAIWGAKLD NAPGLRITNM LDEAVGGSFK GMYIQGEDIA QSDPDTHHVT
SGLKAMECIV IQDLFLNETA KYAHVFLPGA SFLEKDGTFT NAERRISRVR KVMAPMGGYG
DWEGTVLLAN ALGYKMEYTH PSEIMDEIAA LTPSFAGVSY DKLEELGSIQ WPCNEKAPLG
TPMMHVDRFV RGKGRFMITE YVPTDERTTG KFPLILTTGR ILSQYNVGAQ TRRTENSRWH
EEDVLEIHPF DAEMRGIVDG DLVALESRSG DIALKAKVTE RMQPGIVYTT FHHAKTGANV
ITTDYSDWAT NCPEYKVTAV QVRRTNRPSD WQAKFYEEDF SLTRIAEAAE
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