| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4403 |
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| Symbol | |
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| ID | 5830937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4898413 |
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| End bp | 4900392 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641370196 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001641842 |
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| Protein GI | 163853799 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC TCAACGACCG GCGCCCTCTC GGTCGACGCG GCCCGAGGAT GCAGGTTAAT
CCGCCGGTCT TCTTCACCTC GGCCGGGCTG ACGCTCGCCT TCGCCGGTCT CAGCGCGCTG
TTTCCCGCAC AGGCCAAGTC GATCTTCGAC AGCCTACAAG CCGCGATCGT GCACGAATTC
GGCTGGTTCT ACATCGCCGT CGTCGCCGGC TTTCTCGGCT TCGCGATCTT CCTGATGCTG
AGCCGCTACG GCGACGTGAA GCTGGGGCCG GACGACAGCG AGCCCGACTA CAGCTACCTG
TCGTGGTTCG CGATGCTGTT CAGCGCCGGC ATGGGCATCG GCCTGATCTT CTTCGGTGTG
GCCGAGCCGC TTCAGCACTA TGCCACGCCC CCCGTCGGCG AGGGCAAGAC CATCGAGGCT
GCGCAGCGGG CGATGGTGCT GACCTTCTTC CACTGGGGGG TGCATGCCTG GGCGATTTAC
ATCGTCGTGG GGCTGGCGCT GGCCTATTTC GCATTCCGCC GCGGGCTGCC GCTGACGGTG
CGCTCGGCCC TCCACCCTCT CATCGGCGAC CGGATCAACG GTCCGATCGG GCACGCGATC
GACATCTTCG CGGTGCTCGG CACGATCTTT GGCGTCGCGA CCTCGCTCGG GCTCGGCGTG
CTTCAGGTCA ATGCCGGTTT CACCCACCTG TTCGGCGTAC CGAACAACAC CTTCGTACAG
ATCATCCTGA TCGCCGCCAT TACCGGCTGC GCCACGCTCT CGGTCGCCTC GGGGCTCGAC
AAGGGCGTGA AGGTCCTGTC CGAACTGAAC ATCATCCTGG CCGTCGTGCT GCTCGCCTTC
GTGCTGATCA CCGGCTCGAC GGTGTTCCTG CTCCAGGCCT TCGTTCAGAA TCTCGGCGCT
TATCTCGGGG CTGTGGTCGA GCGCACGCTC CAGACCTACG CCTACAAGCC CAATGAATGG
CTCGGCAGTT GGACGCTGTT CTACTGGGGC TGGTGGATCG CGTGGTCGCC CTTCGTCGGC
ATGTTCATCG CCCGGATCTC GCGCGGGCGC ACCATCCGCG AATTCGTCAC CGGCGTGCTG
CTGGTGCCGG TGCTGTTCAC GTTCTTCTGG ATGACCGTGT TCGGTAACAC GGCCATCGAG
ATGGATCGCG CCGGCGCAGT GCCGCTCGCG CAGATCGTCA AGGACAACAT GCCGGTCGCC
CTGTTCGAGA TGCTCGGGCA CCTGCCGTTC GGCATGATCG CCTCGGGACT GGCGACGCTG
CTCGTGATCT TCTTCTTCGT CACCTCGGCG GATTCCGGAG CGCTGGTGAT CGACATGATC
ACCTCGGGCG CGGCCGACAA CCCGCCGCTC TGGCAGCGGG TGTTCTGGGC GGTCAGCAGC
GGCGCCATCG CCGCCGTGCT GCTGGTGGCG GGCGGGCTTG AGGCGCTCCA GACGGCGGCG
ATCGCCAGCG CCCTGCCCTT CTCCATCGTG ATGATCTTCA TCTGCTACGG CCTGCTCCGG
GCCCTCCAAC TGGAGGGGCG TGCCGGCGGC CTCGACCTGT CCTCGGCCGC CGCCGGGCCG
TCGGGCGGCC TGTCCTGGCA GGAGCGGCTG GCGGCGATCA CCCACTCCTA CCGGAAGGAA
GACCTCAAGA CCTTCCTCGA CGAGACGGTC GCGCCCGCCC TCGAAGCGGT GGCCGGGCAG
ATGCGCGAGA GCGGCTTGTC GCCCGAGGTC GTGCGGTCGG CCGAGCGCAT CGATCTGATC
GTTCCCTACG GGGACCGTGG CGCCTTCCGC TACGGCATCC GCGTGCGCGG ATTGCGGAAT
CCGAGCTTCG CCTGGGCCGA GAATCCGTCG AAGTCGTCGG ATGAGCGCCA TTATCGCGCC
CTCGTTCAGA CCTCCGAGGG CGACCGCCCG CACGACGTCA CCGGCTACGG CCGGGATCGA
GTCATCGACG ATCTCCTGAA GCGCTATGCA CAGTTCCGGG CGGTCCGGGG CGCTGCCTGA
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| Protein sequence | MNDLNDRRPL GRRGPRMQVN PPVFFTSAGL TLAFAGLSAL FPAQAKSIFD SLQAAIVHEF
GWFYIAVVAG FLGFAIFLML SRYGDVKLGP DDSEPDYSYL SWFAMLFSAG MGIGLIFFGV
AEPLQHYATP PVGEGKTIEA AQRAMVLTFF HWGVHAWAIY IVVGLALAYF AFRRGLPLTV
RSALHPLIGD RINGPIGHAI DIFAVLGTIF GVATSLGLGV LQVNAGFTHL FGVPNNTFVQ
IILIAAITGC ATLSVASGLD KGVKVLSELN IILAVVLLAF VLITGSTVFL LQAFVQNLGA
YLGAVVERTL QTYAYKPNEW LGSWTLFYWG WWIAWSPFVG MFIARISRGR TIREFVTGVL
LVPVLFTFFW MTVFGNTAIE MDRAGAVPLA QIVKDNMPVA LFEMLGHLPF GMIASGLATL
LVIFFFVTSA DSGALVIDMI TSGAADNPPL WQRVFWAVSS GAIAAVLLVA GGLEALQTAA
IASALPFSIV MIFICYGLLR ALQLEGRAGG LDLSSAAAGP SGGLSWQERL AAITHSYRKE
DLKTFLDETV APALEAVAGQ MRESGLSPEV VRSAERIDLI VPYGDRGAFR YGIRVRGLRN
PSFAWAENPS KSSDERHYRA LVQTSEGDRP HDVTGYGRDR VIDDLLKRYA QFRAVRGAA
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