| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4205 |
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| Symbol | |
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| ID | 5833241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4678557 |
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| End bp | 4679921 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641369995 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001641645 |
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| Protein GI | 163853602 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.619695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.249841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTATC CTCTTTACGA GGCCGGCCAT CTTATGCTCG CACCGATGCG CTTGGCGGCG
GAAGCCACGA AGCTTGCCTG CGAAAACCCG TTCAATCCCT TCGCCTACGC GCCGCAGAGC
CGCACCATGG CCGCGGGCTG CGAGATGTTC GAGCGTGCCA CCCGCGTCTA CGCCAAGCCG
GCCTTCGGGC TCGGCGTGCC GGAGCGGGTG GTCTGGGAGC GCCCCTTCTG CCGCGTCGTG
GCCTTCGGCG AGCCCTCCGC GGAACTGGAG GCGAAGCCGA AGCTGCTGAT CGTTGCGCCG
ATGTCGGGCC ATTACGCCAC GCTGCTGCGC GGCACGGTCG AGGCGTTCCT CCCCAGCCAT
CAGGTCTTCA TCACCGATTG GTCCGACGCG CGTCAGGTGC CGGCGAGCGC CGGCCGGTTC
GGCCTCGACG ATTACATCGA TACCTGCATC GCCCTGTTCG CAGCACTCGG GCCGGACCTC
CACGTCGCGG CGGTTTGTCA GCCCTCGGTG CCGGTGCTTG CCGCCATCGC CCGCATGGAA
GCGGAGGATC ACCCGCTCGT GCCGCGCTCG GCCGTGCTGA TGGGCGGTCC CGTCGATACC
CGCCGCTCGC CGACCGCCGT CAACCTCATG GCCGAGGAGA AGGGCTTCGC GTGGTTCGAG
CGGCACTGCA TCCACAGGGT GCCGGGCGGA TATCCGGGAG CCGGCCGCGC GGTCTATCCG
GGCTTCCTTC AGCTCGCCGG CTTCATGGGG ATGAACCTTG AGCGCCACCG GGACGCCCAC
CACGCGATGT TCGACCATCT CGTGCGCGGC GACGGCGACT CGGCCTCCCG CCATCGTGCC
TTCTACGACG AGTATCTCGC AGTCATGGAC CTGACTGCCG AGTTCTATCT CGAGACGATT
GAGCGGGTCT TCATCAGCCA CGACTTGCCC CGCGGTACCC TGCGCCATCG CGGCGAACGG
GTCGATCTCG GCGCGATCCG CCGCTGCCAC CTGATGGCGG TGGAGGGCGA GAAGGACGAC
ATCACCGGCC TCGGCCAGAC CAAGGCCGCG CTCGACCTCG CGGTAAACCT GCCCGAGGCG
GCCAAGACCT ACCATATGCA GCCGGGAGCC GGGCATTACG GCATCTTCAA CGGCTCGCGC
TTCCGCCAGG ATATCGCGCC GTTGGTCTGC AGCTTCATGG AACGCAGCCT TCGACCGGCT
GCGCCGCGCC CGGCCCCGGT GGTGCCGGCA CCGGAGCCGC ACCCGATTAT CCTGCGCCAC
GGCCCCATCA TGCAGCCTCC GCGCGCCACG CCCGCCCGCG CCATCGTCTG GCCCGAGCCT
CTGGTCGATC GACCGGGAAC GATCCCGCAG CGGATCGCAC TGTAA
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| Protein sequence | MLYPLYEAGH LMLAPMRLAA EATKLACENP FNPFAYAPQS RTMAAGCEMF ERATRVYAKP
AFGLGVPERV VWERPFCRVV AFGEPSAELE AKPKLLIVAP MSGHYATLLR GTVEAFLPSH
QVFITDWSDA RQVPASAGRF GLDDYIDTCI ALFAALGPDL HVAAVCQPSV PVLAAIARME
AEDHPLVPRS AVLMGGPVDT RRSPTAVNLM AEEKGFAWFE RHCIHRVPGG YPGAGRAVYP
GFLQLAGFMG MNLERHRDAH HAMFDHLVRG DGDSASRHRA FYDEYLAVMD LTAEFYLETI
ERVFISHDLP RGTLRHRGER VDLGAIRRCH LMAVEGEKDD ITGLGQTKAA LDLAVNLPEA
AKTYHMQPGA GHYGIFNGSR FRQDIAPLVC SFMERSLRPA APRPAPVVPA PEPHPIILRH
GPIMQPPRAT PARAIVWPEP LVDRPGTIPQ RIAL
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