| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4201 |
|---|
| Symbol | |
|---|
| ID | 5831982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 4672714 |
|---|
| End bp | 4673505 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641369991 |
|---|
| Product | regulatory protein GntR HTH |
|---|
| Protein accession | YP_001641641 |
|---|
| Protein GI | 163853598 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.316316 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCCG CCATGACACT CGCCGAACGC GAATCGGAGG GCGCGGACGG CCCGATCCCC
CTCCCCGCCC GGCTCCCGGC CGAACTGCCG GCCAAGCCGC GGGAAAACCT CGTGCATTCC
CTCCACGACG AGGTGCTGGC GCGGCTGCGC GAATTCATCG TCGAGGGCAA TCTCGCGCCG
GGCGCTCGTG TCCCCGAACG GCTCCTGTGC GAACGCTTCG GCATCTCGCG CACGCCCCTG
CGGGAGGCGC TGAAGGTGCT GGCGTCGGAG GGGCTGATCG ATCTGCTGCC GAACCGCGGG
GCGCGGGTGC GCCGGATCGG CGAGCAGGAG ATCATCGAGC TGTTCGACGT GATGGGCGGG
TTGGAGGCCC TAGCTGGCCG CCTCGCCTGC GAGCGCATCA CGGACGAGGC CTTTGCCGAG
ATCGAGCGGC TCCACCATGA GATGTACGGC CACTATCTGC GGCGCGACCT GCACGGCTAC
TTCGCCTGTA ATCAGGCGAT CCACGACCGG ATCGTGGCGG CTGCCGGCAA CGGGCCGTTG
AGCGCTACCT ATGCCGGCTT TGCCGGGCGC CTGCGGCGGG CGCGCTACTC GGCCAATCTC
GATGCCAACC GCGACCGTTG GGGCGAGGCG ATGCGGGAGC ACGAGGAAAT CCTCGATGCC
CTGCGCCGCC GGGCCGGTGC GGAACTCAGC GACATCCTGT TCCGCCACCT GCGCAACAAG
CGAAAAGCCG CCGCCGAGCG GGAGGCCGCG CAGCCTTTTT CCAGCGAGCC GACCCCGACC
ACCATCGATT GA
|
|---|
| Protein sequence | MTSAMTLAER ESEGADGPIP LPARLPAELP AKPRENLVHS LHDEVLARLR EFIVEGNLAP
GARVPERLLC ERFGISRTPL REALKVLASE GLIDLLPNRG ARVRRIGEQE IIELFDVMGG
LEALAGRLAC ERITDEAFAE IERLHHEMYG HYLRRDLHGY FACNQAIHDR IVAAAGNGPL
SATYAGFAGR LRRARYSANL DANRDRWGEA MREHEEILDA LRRRAGAELS DILFRHLRNK
RKAAAEREAA QPFSSEPTPT TID
|
|---|
| |