Gene Mext_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4200 
Symbol 
ID5831981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4671387 
End bp4672562 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content70% 
IMG OID641369990 
Productaminotransferase class V 
Protein accessionYP_001641640 
Protein GI163853597 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.357141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACC GCACCGGACG GCACTTCCTG CACATTCCGG GCCCGAGCCC GGTGCCGGAG 
CGGGTGCTGC GCGCCATGGA CCGGCAGGTG ATCGACCATC GCGGGCCGGA CTTCGGCGTG
CTCGGCCGCG AGGTGCTGGA GGGGTGCCGC ACGATCTTCC GCACCAAGGG ACCGGTGGTG
ATCTATCCCG GCTCCGGCAC GGGGGCCTGG GAAGCGGCGA TCGTCAACAC GCTCTCGTCG
GGCGACCGGG TGCTGATGTT CGAGACTGGC CACTTCGCCA CCCTCTGGCG GCAGATGGCG
GCGCGGTGGG GCATCGAGGT CGAGTTCGTG CCCGGCGATT GGCGCCACGG CGTTGATCCG
GCCCTGGTCG AGGCGAAGCT CGCCGAGGAT CGCAGCCATT CCTTCAAAGC CGTGATGGTG
GTCCACAACG AGACTTCCAC CGGCGTCACG AGCCGCATCC CCGCCATCCG CAAGGCGATC
GACGCCGCCG GCCATCCGGC GCTGCTGCTG GTCGATACGA TCTCCTCGCT CGGTTCGGTC
GATGTCCGCC ACGACGAGTG GGGCGTCGAC GTCACCGTCA GCGGCTCGCA GAAGGGCCTG
ATGCTGCCGC CGGGCCTCGG CTTCACCGCG ATCTCGGAGA AGGCCCGGGC CGCCGGAAAG
TCCAACAACC TCCCCCGCTC CTACTGGGAT TGGGAGGAGA TGCTGAAGCC CAACGCCAAC
GGCTACTTCC CCTACACGCC GGCCACCAAC CTGCTCTACG GCCTGCGCGA GGCGGTGGCG
ATCCTGCTCG AAGAAGGGCT CGACAACGTC TTCGCCCGCC ATCAGCGGCT GGCGGCCGCG
ACCCGGGCCG CGGTCGAAGC CTGGGGCCTC GAAGTGCTGT GCCTGAACCC GGACGAGCAC
TCGCCGGTGC TCACCGCGGT GATGATGCCG GACGGCAAGG GGGCGGACGC CTTCCGCGCC
CTGGTGCTCG AGAAATTCGA CATGTCGCTC GGCGCCGGGC TGTCGAAGCT CGCCGACAAG
ATCTTCCGCA TCGGCCATCT CGGCGAGACC AACGACCTGA CCCTGATGGG TGCCCTCTCC
GGCGTCGAGA TGGGCTTGGC AGCGGCCGGC GTGCCGCACC GGCCGGGTGG CGTGCTCGCC
GCCATGGCGA GCCTGCGCTC CGGCCTCGAC GGCTGA
 
Protein sequence
MTHRTGRHFL HIPGPSPVPE RVLRAMDRQV IDHRGPDFGV LGREVLEGCR TIFRTKGPVV 
IYPGSGTGAW EAAIVNTLSS GDRVLMFETG HFATLWRQMA ARWGIEVEFV PGDWRHGVDP
ALVEAKLAED RSHSFKAVMV VHNETSTGVT SRIPAIRKAI DAAGHPALLL VDTISSLGSV
DVRHDEWGVD VTVSGSQKGL MLPPGLGFTA ISEKARAAGK SNNLPRSYWD WEEMLKPNAN
GYFPYTPATN LLYGLREAVA ILLEEGLDNV FARHQRLAAA TRAAVEAWGL EVLCLNPDEH
SPVLTAVMMP DGKGADAFRA LVLEKFDMSL GAGLSKLADK IFRIGHLGET NDLTLMGALS
GVEMGLAAAG VPHRPGGVLA AMASLRSGLD G