Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4085 |
Symbol | |
ID | 5832966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4544568 |
End bp | 4545914 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641369876 |
Product | capsule polysaccharide export protein-like protein |
Protein accession | YP_001641526 |
Protein GI | 163853483 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3524] Capsule polysaccharide export protein |
TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.160773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.368018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCCG ACGACGAGGT CAAGCAGGCG ACGCGGGTCC GGCCGAGCCC GAGCGTCCAA TCGCTCATGG ATCTTGCCCG GCGCTCCGTG CCGGATCTGC GGCGCAACGC CGAGACGATC GAGCCGGTCT CCCCGGGCAA GGGCCGCTTC CCCGGTCGGG CGCTGGTCGA GCGGGCACGC CGCGGCCTCG AATGGACCCG GCTGCCCGGT CTGCGGCCGC GGCAGGCGCG TCCGCCCGAG CGGATGGCCA AGCGACTGTT CCGCAGCTAC TGCCTGTTCG CGCTGGCGCC GACCGCGGTG GTCGGCCTCT ACGTCTTCGC GATCGCCAGT CCGCAATACA TTGTCGTGTC GCAGTTCGCC GTGCGCGGCA ACGTCGAGCC GATGGCCAGC GCCGAACTCG GCCTGCACAG CGACCTGATC CAGAAGCACA ACAGCCAGGA CAGCTTCATC CTGCGCGACT ACATCGGCAG CCGGCCGATG GTGGAGGCCG TCGATGCCAA GCTCGGCCTC GAACGGATGT TCTCGCAGGA CGGGATCGAT TTCTGGGCCG GCTACGGCGC GGGTCAGCCG ATCGAGAAGC TGGTGCGCTA CTGGCGCCGG CAGGTGATCC CGCACATCGA TGCGATTTCC GGCGTGATCC ACCTGAAGGT GCGCGCCTTC AAGCCCGAGG ACGCGGTCGC GATCTCGGAA GAGGTGATCG CCCGCTCCGA GACCTTGATC AACAGCATCT CGCGCCGCGC CCAGAGCGAC ATGATCGCCA ACGCGAAGAA GGAGGTCGAG CAGTCGTTCG AGCGGCTCAA GCAGGCGCGG GTCGCGATGC AGGAGTTCCG CAACCGCTGG GGCATCATCG ATCCCGTGAA GTCGGCCGAG GCGGCCGTGA CCACGATCGA GCTCCTGCGC AAGGACAAGA TCAAGGCGGA GAACGACCTG CGCGTGCTGC GCGACTCCAA GCTCGACGAG AAGAGCCGTG GCATCCAGGT GCTCGTGGCC ACCCTCGGCG CGCTGGACGG GCAGATCAAG GATCTGCAGG GCCGCCTCAC CACCGACGGC ATCGTCTCGA ATTCCGAGCA CAACCTCACC CAGGCCCTGC TCGAATACGA GGGCCTGATG GTCGAGCAGA CGGTGGCGGA GAAGCTCAAC GCCTCGATGC AGATGATCCT CGACCGCGCC CGGGTCGCGG CGGCCAAGCA ACAGATCTAT CTGGCGACCT TCGTGCCGCC CCTGCTGCCG ACTTATTCGG AATACCCGGC CCCCTTCTAC GCCCTGTTCG CGGCCCTGTT CTGCTTCACC GTCCTGTGGA GTTCGGTCTC GCTCGTGACC GCAGCGGTCA ACGACAACCG GCTCTAG
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Protein sequence | MSSDDEVKQA TRVRPSPSVQ SLMDLARRSV PDLRRNAETI EPVSPGKGRF PGRALVERAR RGLEWTRLPG LRPRQARPPE RMAKRLFRSY CLFALAPTAV VGLYVFAIAS PQYIVVSQFA VRGNVEPMAS AELGLHSDLI QKHNSQDSFI LRDYIGSRPM VEAVDAKLGL ERMFSQDGID FWAGYGAGQP IEKLVRYWRR QVIPHIDAIS GVIHLKVRAF KPEDAVAISE EVIARSETLI NSISRRAQSD MIANAKKEVE QSFERLKQAR VAMQEFRNRW GIIDPVKSAE AAVTTIELLR KDKIKAENDL RVLRDSKLDE KSRGIQVLVA TLGALDGQIK DLQGRLTTDG IVSNSEHNLT QALLEYEGLM VEQTVAEKLN ASMQMILDRA RVAAAKQQIY LATFVPPLLP TYSEYPAPFY ALFAALFCFT VLWSSVSLVT AAVNDNRL
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