| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4055 |
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| Symbol | |
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| ID | 5832861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4511959 |
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| End bp | 4514685 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641369846 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001641496 |
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| Protein GI | 163853453 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.660857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAC CCAAGACACC GCGCGTGAGT CCGGCCAAAG CGCCTGCCAA AGCGACCTCG
AAGACGACGG CGAAGGCCGA CCGGCCCGAG CTGATGCCGC TCGACGAGCA TCTTGCCGCG
CTGCTCAACC CGGCCCTCAA CCGCAACCGC TTGAAGGCGG TCGAGCCCGT GCCGGAACCG
CCCCGGAAGG GACGCGGGCA AAAGGGTGAA GCGAAAGCCT ACAAGAAAAT CGCGCAGGAC
GGCTTCGCCG AGGCGCCTCA GGCGGGCTTC GCCATCGGCG ACGCGGCCGA CGTCGATCCG
CGGCTGGCCC AGGCGCTCGG CCTCGTCCCG CCCGACGACG GCCCGGCACC GGAAACCGCG
GCCGATGCCG AGACGCCTTC GCTTGCGACG GAGGGTGTCT CAGCCACGGT CGAGGCGCTG
GAGCGGCTGC TCGTCGAGGG CAACCCGCTG TTCAAGAACG GCGAGGCCTG GGTGCCGCAC
AGGCCCGAGC GCCCGGCCAA GTCGGAGGGC GGCGTGAAGT TCACGCTGAA ATCCGAGTTC
ACGCCCGCCG GTGACCAGCC CACCGCCATC GCCGCCCTGG TCGAGGGTGT CCGGACGGCC
GAGCGCGATC AGGTGCTGCT CGGCGTCACC GGCTCGGGAA AAACCTTCAC GATGGCCAAG
GTCATCGAGG AGACGCAGCG CCCGGCCCTG ATCCTGGCGC CCAACAAGAC GCTGGCGGCG
CAGCTCTACG GCGAGTTCAA GAGCTTTTTC CCGGACAACG CGGTCGAGTA CTTCGTCTCG
TATTATGACT ATTACCAGCC CGAGGCCTAC GTGCCCCGGT CCGACACCTT CATCGAGAAG
GAAAGCTCGA TCAACGAGCA GATCGACCGG ATGCGCCACT CGGCCACCCG CGCCCTGCTG
GAGCGGGACG ACGTCATCAT CGTCGCCTCG GTCTCGTGCA TCTACGGTAT CGGCTCGGTC
GAGACCTACA CGGCGATGTC GTTCACCGTG TCGCTCGGCG AGCGGATCGA GCAGCGCCAG
CTCATCGCCG ACCTCGTGGC CCTTCAGTAC AAGCGCATCC AGTCGGACTT CGCCCGCGGC
ACCTTCCGGG TGCGCGGCGA CGTGATCGAG CTGTGGCCGG CCCACTTGGA GGATCGCGGC
TGGCGCATCG GCCTGTTCGG CGACGAGATC GAATCCATCG TCGAGTTCGA TCCGCTGACG
GGCAAGAAGC TCAACGAGCT GAAGTTCGTC AAAGTCTACG CGAACTCGCA CTACGTCACG
CCGCGCCCCA CCCTCCAGCA GGCGATCAAG GGCATCAAGA CCGAGCTCAA GCTTCGCGTC
GAGGAGCTGA CCCGGATGGG CCGCCTCATC GAGGCGCAGC GGCTGGAGCA GCGCTGCACC
TTCGACATCG AGATGATCGA GGCCACCGGC GCCTGCAACG GCATCGAGAA CTATTCGCGC
TACCTCACCG GCCGCAAACC CGGTGAGCCG CCGCCGACCC TGTTCGAGTA CCTGCCCGAC
AACGCCCTCG TCTTCACCGA CGAGAGCCAC GTCACGGTTC CGCAGATCGG CGGCATGTAC
AAGGGCGACT TCCGCCGCAA GGCGACGCTG GCCGAGTACG GCTTCCGCCT GCCCTCCTGC
CTCGACAACC GCCCGCTGCG GTTCGAGGAA TGGGACGCGA TGCGCCCGCA ATCGGTCCAC
GTCTCGGCGA CCCCGGCCAA GTGGGAGATG GAGCGCACGG CCGGCGTCTT CGCCGAGCAG
GTCATCCGCC CCACCGGCCT CGTCGATCCG GTGATCGAGA TCCGCCCGGC CCGCTCCCAG
GTCGACGACC TGCTGGGCGA AGTCCGCGAA GTCGCCCAGG CCGGCTACCG CACCCTGGTG
ACCACGCTGA CCAAGCGCAT GGCCGAGGAT CTCACCGAGT ACCTGCACGA GAACTCGGTG
CGGGTGCGCT ACATGCACTC CGACATCGAC ACCCTGGAGC GCATCGAGAT TATTCGCGAC
CTGCGCCTCG GCGCCTTCGA CGTGCTGATC GGCATCAACC TCCTGCGCGA GGGTCTCGAC
ATCCCCGAAT GCGCGCTGGT CGCCATCCTC GACGCCGACA AGGAAGGCTT TCTGCGCTCC
GAGACCTCGC TGATTCAGAC CATCGGCCGC GCCGCCCGCA ACGCGGATGC CCGCTGCATC
CTCTACGCAG ACAACATCAC CGGCTCGATG GAGCGGGCGA TGGCCGAGAC CGAGCGCCGC
CGCCAGAAAC AGCTCGCCTA CAACGAGGAA CACGGCATCA CGCCGCAATC GGTCAAGCGC
GGCATCAGCG ACATCCTCGA GAGCGTGTAC GAGCGCGACC ACGTTCGCGT CGATACGGGG
CTGGCCAAGG ACGCGATCAC CGTCGGCCAC AACCTCAAGG CGGTGATGGC CGACCTCGAG
AAGCGGATGC GCGCCGCCGC CGCCGATCTC GACTTCGAGG AGGCCGCACG GCTTCGCGAC
GAGCTCAAGC GCCTCCAGGC GACCGAACTC ATGGTCTCCG ACGATCCCAT GGCCCGGCAG
GGCGACATCG AGCGCGAGGC CGGCCGCTAC GGGCAGAAGG GCAGCCGCAT CTCGAAGCCC
ACCCTCGACA ATATGGGCCC CGGCACCGAC CGCGAACTCC CGGCCGACGC CGTGCCCTGG
CAGGAGCGGC CGAAGGCGCG CTCGACGCAG GGGCTCGGCG GTCAGAAGCC CCGCTACAAG
GGCGGCGGCG GACGCAAGCG AGGGTGA
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| Protein sequence | MPAPKTPRVS PAKAPAKATS KTTAKADRPE LMPLDEHLAA LLNPALNRNR LKAVEPVPEP
PRKGRGQKGE AKAYKKIAQD GFAEAPQAGF AIGDAADVDP RLAQALGLVP PDDGPAPETA
ADAETPSLAT EGVSATVEAL ERLLVEGNPL FKNGEAWVPH RPERPAKSEG GVKFTLKSEF
TPAGDQPTAI AALVEGVRTA ERDQVLLGVT GSGKTFTMAK VIEETQRPAL ILAPNKTLAA
QLYGEFKSFF PDNAVEYFVS YYDYYQPEAY VPRSDTFIEK ESSINEQIDR MRHSATRALL
ERDDVIIVAS VSCIYGIGSV ETYTAMSFTV SLGERIEQRQ LIADLVALQY KRIQSDFARG
TFRVRGDVIE LWPAHLEDRG WRIGLFGDEI ESIVEFDPLT GKKLNELKFV KVYANSHYVT
PRPTLQQAIK GIKTELKLRV EELTRMGRLI EAQRLEQRCT FDIEMIEATG ACNGIENYSR
YLTGRKPGEP PPTLFEYLPD NALVFTDESH VTVPQIGGMY KGDFRRKATL AEYGFRLPSC
LDNRPLRFEE WDAMRPQSVH VSATPAKWEM ERTAGVFAEQ VIRPTGLVDP VIEIRPARSQ
VDDLLGEVRE VAQAGYRTLV TTLTKRMAED LTEYLHENSV RVRYMHSDID TLERIEIIRD
LRLGAFDVLI GINLLREGLD IPECALVAIL DADKEGFLRS ETSLIQTIGR AARNADARCI
LYADNITGSM ERAMAETERR RQKQLAYNEE HGITPQSVKR GISDILESVY ERDHVRVDTG
LAKDAITVGH NLKAVMADLE KRMRAAAADL DFEEAARLRD ELKRLQATEL MVSDDPMARQ
GDIEREAGRY GQKGSRISKP TLDNMGPGTD RELPADAVPW QERPKARSTQ GLGGQKPRYK
GGGGRKRG
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