Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3995 |
Symbol | |
ID | 5835665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4435946 |
End bp | 4436512 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641369786 |
Product | 2'-5' RNA ligase |
Protein accession | YP_001641437 |
Protein GI | 163853394 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0173651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.591095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCC TGTTCACCGG GCTCGAGATC CCGCCGGACA TCGCCGAGCG GCTGTCGTTC TTCCGCGGCG GCCTGCCCGG CGCGCGCTGG ATCGAGCCGA GCGACTACCA CGTCACCCTG CGCTTCCTCG GCGAGATCGA CGACATGATC GCCGCGGATG TCGATGCCGG CCTGCGGGAG GCGCGGGTGC GCGCGCCGCT CACCGTGACG CTGGACGGGC TCGCGAGCTT CGGCGGCGAC CGGCCGCGGG CGCTCTACGC CTCGGTCGTC CCCACGCCGG AACTCGTCGA ACTGCAGGAA GAGCACGAGC GCATCGCCCG CCGGGCCGGG GCCGCGCCGG AGCGGCGCAA GTTCACGCCG CATGTGACGC TGGCCCGCCT CAACCGCGAG GCCTCCCCGG AGGCCGTGGC GCGAAGGCTG ACGGAGGCGG GGGTGTTTCC CCGCCTGACC TTCACGGCAC GCCGCGCCGC CCTGTTCTCC GCCCGCACCT CGCGCGGCGG CGGGCCCTAC CTCGTCGAGG CGGCCTATCC CTTCGCGGAT GCGGATTTCG AGCTGGACGA CGAATAG
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Protein sequence | MPRLFTGLEI PPDIAERLSF FRGGLPGARW IEPSDYHVTL RFLGEIDDMI AADVDAGLRE ARVRAPLTVT LDGLASFGGD RPRALYASVV PTPELVELQE EHERIARRAG AAPERRKFTP HVTLARLNRE ASPEAVARRL TEAGVFPRLT FTARRAALFS ARTSRGGGPY LVEAAYPFAD ADFELDDE
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