Gene Mext_3978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3978 
Symbol 
ID5835217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4421435 
End bp4422187 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content66% 
IMG OID641369769 
ProductFeS assembly ATPase SufC 
Protein accessionYP_001641420 
Protein GI163853377 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component 
TIGRFAM ID[TIGR01978] FeS assembly ATPase SufC 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.648444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGA TCAAAAACCT CGTCGTGCAG ATCGAGGACA ACCGCATCCT CAACGGCCTG 
AACCTCACCG TGAACGACGG CGAGGTCGCC GCGATCATGG GCCCGAACGG GTCGGGCAAG
TCGACGCTCT CCTACGTCAT CGCCGGAAAG GAGGACTACG AGGTCCTCGA CGGCGAGATC
CTGCTCGACG GGCAGAACGT GCTGGAGATG GCCGCCGACG AGCGCGCAGC CGCCGGCATC
TTCCTCGCCT TCCAGTACCC GCTGGAGATC CCGGGCGTCG GCACGATGAC CTTCCTCAAG
GCCTGCCTCA ACGCGCAGCG CAAGGCCCGC GGCGAGGCCG AGCTCTCGAC CCCCGACTTC
ATCCGCGCGG TGAACGCGGC CGCGGACAAG CTCGAGATCA ACAAGGAGAT GCTCAAGCGC
GCCCTCAACG TCGGCTTCTC CGGCGGCGAG AAGAAGCGCA TGGAGATCCT CCAGATGGCG
CTGCTGCAGC CGAAGTTCTG CGTGCTCGAC GAGACCGATT CCGGCCTCGA CATCGACGCG
CTGCGCATCG TGTCCGAGGG CGTGAACGCG CTGCGCGCGC AGGGTCGCTC GTTCCTCGTC
ATCACCCACT ACCAGCGGCT CCTGAACCAC ATCGTGCCCG ACACCGTGCA CGTCATGTCG
AAGGGCCAGA TCGTGAAGAC CGGCGGCAAG GAGCTGGCGC TGGAACTCGA GGCCTCTGGC
TACGCCGAGT ACCGCACGAG CGAGGCTGCG TGA
 
Protein sequence
MLEIKNLVVQ IEDNRILNGL NLTVNDGEVA AIMGPNGSGK STLSYVIAGK EDYEVLDGEI 
LLDGQNVLEM AADERAAAGI FLAFQYPLEI PGVGTMTFLK ACLNAQRKAR GEAELSTPDF
IRAVNAAADK LEINKEMLKR ALNVGFSGGE KKRMEILQMA LLQPKFCVLD ETDSGLDIDA
LRIVSEGVNA LRAQGRSFLV ITHYQRLLNH IVPDTVHVMS KGQIVKTGGK ELALELEASG
YAEYRTSEAA