| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3880 |
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| Symbol | |
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| ID | 5832291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4307608 |
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| End bp | 4308198 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641369670 |
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| Product | transcription factor CarD |
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| Protein accession | YP_001641323 |
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| Protein GI | 163853280 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.260556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0799721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAG CCAAGAAGAC GACGGTAGCA GGCCGCCAAG GCTTCAAGAC CGGCGAGGCG
GTCGTGTATC CGGCGCACGG CGTCGGGCGG ATCACCGCGA TCGAAGAGCA GGAGATCGCG
GGCTACAAGC TCGAACTGTT CGTCGTCTCG TTCGAAAAGG ACAAGATGGT CCTGCGCGTT
CCCACCGCGA AAGCCAACAG CGTCGGCATG CGCAAGCTCG CCGAGCCGGA ACTCGTCAAG
AAGGCCCTCG ACGTGCTCAC CGGCCGCGCC CGCGTCAAGC GCACGATGTG GTCGCGCCGC
GCCCAGGAAT ACGAGGCCAA GATCAATTCC GGCGACCTGA TCTCGGTCAC CGAAGTGGTG
CGCGACCTCT TCCGCTCCGA GGCCCAGCCC GAGCAGTCCT ACAGCGAGCG TCAGCTCTAC
GAGGCCGCTC TGGACCGCGT CGTGCGCGAG ATCTCCTCGG TGAACAAGAT CACCGAGACC
GAAGCGCTCA AGCTGATCGA GCAGAGCCTC GCGAAATCGC CGCGCCGCGC CAAGGCCGAC
GCGGAAGCCG ATGCCGAGGG CGAGGACGAC GTGCAGGAAG AGGCCGCCTG A
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| Protein sequence | MTTAKKTTVA GRQGFKTGEA VVYPAHGVGR ITAIEEQEIA GYKLELFVVS FEKDKMVLRV
PTAKANSVGM RKLAEPELVK KALDVLTGRA RVKRTMWSRR AQEYEAKINS GDLISVTEVV
RDLFRSEAQP EQSYSERQLY EAALDRVVRE ISSVNKITET EALKLIEQSL AKSPRRAKAD
AEADAEGEDD VQEEAA
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