Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3839 |
Symbol | |
ID | 5833469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4265817 |
End bp | 4267520 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641369629 |
Product | hypothetical protein |
Protein accession | YP_001641282 |
Protein GI | 163853239 |
COG category | [R] General function prediction only [S] Function unknown |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases [COG3453] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01244] conserved hypothetical protein TIGR01244 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.359472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTTT ATATAGCGAC GGAGCCGTCG GTGGACGTCC ATCACATCAC GCGCGACTTG GCCGTCGCGC CACAGATCCG GCCTGACGAC ATCCCGGCGG TCGCGTCCGC CGGGTTCCGG TCGATCCTCT GCAACCGCCC CGACGGCGAG GCCCCCAACC AGCCGAATTT TCGTGAGATC GAGCGGCGGG CCGGGGAGGG CGGCCTCGTC GTCCGCTACC TGCCGGTCAC GTCGAGCCGT ATCACCGACG CGGATGTCGC AGCCTTCGAG GCGGCGGCGG ACGCCCTACC GAAGCCGATC CTTGCCTATT GCCGCACCGG CACGCGCTCG GCGACGCTGT GGTCGCTCGC CCAGGCACGG CGCGGCCGCG CCGTGGCGGA GATCCTGGCT GCGACGAAGG CCGCAGGCTA CGACCTGAAA GGCGCCGCGC CCCGGATGGC GGCGCAGGCC GGCGCGGCGA AAGAGAGAAC CGAGCAACGG TTCGCGATTG TCATCGTCGG CGGCGGCTCG GCCGGCCTCG CGGCGGCCTC AAGCCTGAAG GCGCGCAAGC CCGACCTGGA GGTCGCCGTG ATCGATCCGG CCGACATCCA CTACTACCAG CCCGGCTGGA CACTGGTGGG CGCCGGCGTG TTCGACCCGG CGGTGACCGC CCGGACCATG GCGTCCCTGA TCCCGGACGG CGTGACGTGG ATCAAGGCCG GCGTTGTCGC CTTCGAGCCG CAGAGGAAGG CCGTGATGCT GGAGGACGGC CGGACCATCG GCTACGACCG CCTCGTCGTC GCCCCCGGCC TCAAGCTCGA CTGGGACGGC ATCGAGGGGC TGGTCGAAAC GCTCGGCCGG AACGGGGTCA CCTCGAACTA CCGCTTCGAC CTCGCGCCCT ATACCTGGGA GCTGGTCCGG AACCTCGGCG GAGGACGGGC CGTGTTCACC CAGCCCCCCA TGCCGATCAA GTGCGCGGGC GCCCCGCAGA AGGCGATGTA TCTCTCCGCC GACCATTGGC GGCGCGCGGG CCGCCTGAAG CAGATCGGGA TCGACCTCTT CACGGCGGCC CCGAGCCTGT TCGGCGTGAA GGAATACGTG CCGCCCCTGA TGGAGTACGT CCGGCGCTAC GACGCGAAGC TGCACTTCCG TCACGACCTC ACGCGCATCG ACGGCTCGGC CAAGCGCGCG TGGTTCACCC GCACGGCCGA GGACGGAACC CAATCGACGG TCGAGACCGG GTTCGACATG ATCCATGTCG TTCCGCCCCA GCAGGCCCCC GATTTCATCA GGGAATCCCC CCTGGCGGAT CCGAGCGGCT GGGTCGAGGT GGACCCGGCG AGTCTGCGCC ACAAGCGCTT TACCGACGTG TACGGGCTGG GCGACGCTTG CAGCGCGCCG AACGCCAAGA CCGCCGCCGC GGCGCGCAAG CAGGCGCCGG TGGTGGCGCA CAACCTGCTG CGCGACATGG GCTTCATCGA GGGGCCGGAT GCCATTTACG ATGGCTACGG CTCGTGCCCG CTCACCGTCG AGCGCGGCAA GATCCTGCTT GCCGAGTTCG GCTATGGCGG CAAGCTTCTT CCCAGCTTCC CGTCCTGGCT GCTCGACGGC ACGAAGCCGA GCCGGGCCGC GTGGCTGCTC AAGGAGCGCC TGCTCCCGCC CCTCTACTGG CACGGCATGC TCAAGGGGCG CGAGTGGATG GCCAAGCCCA GGCGGGCGGT TTGA
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Protein sequence | MQFYIATEPS VDVHHITRDL AVAPQIRPDD IPAVASAGFR SILCNRPDGE APNQPNFREI ERRAGEGGLV VRYLPVTSSR ITDADVAAFE AAADALPKPI LAYCRTGTRS ATLWSLAQAR RGRAVAEILA ATKAAGYDLK GAAPRMAAQA GAAKERTEQR FAIVIVGGGS AGLAAASSLK ARKPDLEVAV IDPADIHYYQ PGWTLVGAGV FDPAVTARTM ASLIPDGVTW IKAGVVAFEP QRKAVMLEDG RTIGYDRLVV APGLKLDWDG IEGLVETLGR NGVTSNYRFD LAPYTWELVR NLGGGRAVFT QPPMPIKCAG APQKAMYLSA DHWRRAGRLK QIGIDLFTAA PSLFGVKEYV PPLMEYVRRY DAKLHFRHDL TRIDGSAKRA WFTRTAEDGT QSTVETGFDM IHVVPPQQAP DFIRESPLAD PSGWVEVDPA SLRHKRFTDV YGLGDACSAP NAKTAAAARK QAPVVAHNLL RDMGFIEGPD AIYDGYGSCP LTVERGKILL AEFGYGGKLL PSFPSWLLDG TKPSRAAWLL KERLLPPLYW HGMLKGREWM AKPRRAV
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