Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3729 |
Symbol | |
ID | 5832630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4129276 |
End bp | 4130337 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641369519 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001641174 |
Protein GI | 163853131 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.19574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCGC CGCTGCCTCA GCCTCCTCCC GAGAGGGACG CCGTTCCGGC GGTCGCGGTC GCCCCGCTCC CGCCGGTGGC GGGCGCCGCC CCGGTCGTCG GGCGGGTGCG GCTCTCCTGG GTCGGCGCGC CGCGCCCGCT GACCCGGCGT CGGCGCGTGG CGCTCACCCT GCTCTCCTTC CTGCTGCCGC TCGGGCTGTG GGCGGCGGTC TCCTACCTGC CCTTCCTCTG GCACCCGCTG GTCGAGGTCA CGAATCCCGG CGACGTCGCC TGGATGGAAC CCGGCATGCG GGTGCCGCGG GCGGCGTTTT CCGAAGAGGT CGCGGCGGCC CAGGGCGGGG GGATGGCTGT GCCCGAGGGC CGCGGGGCCA ACCCGGTCTA CCTGCCCGCG CCGCACGAGG TCGCGGTGGC CTTCTGGACC TCGCTCACGG CGCCGCCACC GCAGCGCGAC ACGATCTGGC TGCCCGCGAG CCTCTGGCAC TCGATCCAGA TCATTTTTTG GGGTTTTACC CTCTCCTCCC TGGTCGGCGT GCCGCTGGGC ATCCTGTGCG GGGCGCAACC GACGATCGCC CGGCTGACCG AGCCCGTGAT CGAGTTCGTG CGCTACCTGC CCGCCCCCGC CTTCGGCGCG CTGATGGTCG CGATCCTCGG GATCTACGAC GGGCCGAAGA TCGCCATCAT CGTCATCGGA ACCTTCTTCC AGCAGGTGCT CGTCATCGCC AACACCACGC GACGGGTCGA TCCGCTGCTG ATCGAGGCCG CGCTCACCAT GGGCTCGCGC AACCTGCGCC TGATCCGGCG GGTGATCGTG CCGGCGGTGC TGCCGCAGAT CTACCGCGAC CAGCGCATCC TGCTCGGCTG GGCCTGGACC TATCTCATCG TCGCCGAGCT GATCGGCACC TCGTCCGGCA TCACCTTCTT CATCACGCAG CAGGCCCGCT ACCAGCATTT CGACAACGTC TACGCGGCGA TCCTCGTGAT CGGCCTCGTC GGCATCGCCA CCGACATCGC TCTGGCCCTG CTCGGCCGCC GCCTGTTCCC CTATGCGAGG GCCGAGGCAT GA
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Protein sequence | MRAPLPQPPP ERDAVPAVAV APLPPVAGAA PVVGRVRLSW VGAPRPLTRR RRVALTLLSF LLPLGLWAAV SYLPFLWHPL VEVTNPGDVA WMEPGMRVPR AAFSEEVAAA QGGGMAVPEG RGANPVYLPA PHEVAVAFWT SLTAPPPQRD TIWLPASLWH SIQIIFWGFT LSSLVGVPLG ILCGAQPTIA RLTEPVIEFV RYLPAPAFGA LMVAILGIYD GPKIAIIVIG TFFQQVLVIA NTTRRVDPLL IEAALTMGSR NLRLIRRVIV PAVLPQIYRD QRILLGWAWT YLIVAELIGT SSGITFFITQ QARYQHFDNV YAAILVIGLV GIATDIALAL LGRRLFPYAR AEA
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