| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3659 |
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| Symbol | |
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| ID | 5832870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4042615 |
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| End bp | 4045764 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641369452 |
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| Product | ribonuclease |
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| Protein accession | YP_001641108 |
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| Protein GI | 163853065 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACA ACAAGATGCT CATCGATGCG ATGCATCCGG AGGAGACCCG GGTCGTCACA
GTCCAAGGCT CGCGGGTCGA GGAATTTGAT TTCGAGGCGG CCAACCGCCG GCCTCTGAGG
GGCAACATCT ATCTCGCCAA GGTCACCCGC GTGGAGCCCT CGCTCCAGGC GGCCTTCGTC
GAGTACGGCG GCAACCGCCA CGGCTTCCTC GCCTTCAACG AGATCCACCC CGATTACTAC
CAGATCCCGA TGGCCGACCG CCTCGCGCTG ATCGAGGCCG AGGCGCGCGA GGAAGAGGAG
CACCGCGAGC GCGAGGAGCG CCGTCCGCCG CGGGGCCGCC GCTCGCGCGG GCGCCGGGCC
GAGGCCCGCG GCTCGCGCCC CGACGACACG GTGAAGTCGC AAGAGGCGGT GTCCGACGCA
GGCTCCGAGG ACGCTGCGAT CCCCGGTGAG GGCCAGGCCG CCGACGCGCC CGCGCCGGAG
GCGATCGAGG CGGTGCGGTC CGCTCTCGTC GAAGGACGGA TCGAAGAACG GAACGACGAG
CGGAGCGAGA GCGACGCGGC GTCCGCACCG GTCGAGGCCG GCGGCGATGC CTCCGCGAGC
CTGCCCGAGG CGGCGCTGGA GCCCCCCACC TCCGCCAGCG AGGCGCCGGC TGACGAAGCC
GCCGCGGTCG AGCCCTCCGA CATCGCCGCG ATCTCCGAGG CGCCGAACCC GCCCGTCGAA
ACCACGGAAT CCTCCGAGGC TGCTCCCGCC GAGGTCGATT CCGCTGAGGC AGAGACGGTC
GAGCCGCAGC CCGTCGCCGC CAGCGCGCCC GTCTCCCAGG CCGAGATCGA GGAAGCCGAC
GCGGATTCGG ACGAGGACTC CGAGACCGAC GACTCGGACG ACGAGGACTC GGAGGATGAC
GAGTCCGACG ACGAGGATGA GGACGACGAT TCCGAGGACG ACGATTCGGA CGACGAGGAC
GACGACGAGG AATCCGAGGA CGGCGAGCCG CGCGTCGCGC AGGTCGGCGG CTCGGGCGAT
GCGCTCGCCG AGCTCCCCGA GCGTCCGCGC GCCTATCGCC GCCACTACAA GATCCAGGAG
GTGATCAAGC GCCGCCAGAT CATCCTCGTC CAGGTCGTCA AGGAAGAGCG CGGCACCAAG
GGCGCGGCGC TCACCACCTA CCTGTCGCTG GCCGGCCGCT ACTCGGTGCT GATGCCCAAC
ACCGGACGAG GCGGCGGCAT CTCGCGCAAG ATCACCTCGG CCGCCGACCG CAAGCGCCTC
AAGGAAGTGG TCGCCGACCT CGACGTGCCG GATGGGATGG GGATCATCCT GCGCACGGCC
GGCGCCTCGC GCACCAAGCC CGAGATCAAG CGCGACTTCG AGTACCTGAT GCGCCTGTGG
GAGAGCGTGC GCGAGCTGAC GCTGTCCTCG ACCGCCCCGG CGCTCGTCTA CGAGGAGGGC
TCGCTGATCA AGCGGGCGAT CCGCGACCTC TACAACAAGG ATCTCGACGA GGTTCTGGTC
TCCGGCGAGG ACGCCTACCG CGAGGCCAAG GACTTCATGC GGATGCTGAT GCCCGGCCAG
TCCAAGGTCG TGAAGCCCTA CCGCGATCCG ACGCCGATCT TCGCCCGCTA CGGCGTCGAG
CAGCAGCTCG ACGCGATGTT CTCGACCCAC GTGGCGCTGC GCTCCGGCGG CTACCTCGTC
ATCAACCCGA CCGAAGCGCT GGTCTCGATC GACGTGAACT CGGGCCGCGC GACCCGCGAG
CACGACATCG AGGACACCGC GCTCAAGACG AACCTCGAGG CAGCCGAAGA GGTCGCCCGG
CAGGTGCGCC TGCGCGATCT GGCCGGCCTC GTCGTGATCG ACTTCATCGA CATGGAGGAG
AAGCGCAACA ACCGGGCGGT GGAGAAGCGC CTGAACGAGG CGCTCAAGAA CGACCGGGCG
CGCATCCAGG TCGGGCGGAT CTCGCCCTTC GGCCTGCTTG AGATGAGCCG CCAGCGCATC
CGCACCGGCG TGCTCGAATC CTCCTCGATC CCCTGCGCCC ATTGCGGCGG CTCGGGCTTC
GTGCGGGCGA CCTCCTCGGT GGCGCTGCAC ATCCTGCGCT CGATCGAGGA AGTGCTGCTC
AAGTCGGCGA GCCACAACGT CGTGCTGCGC ACCCGCACCG AGACGGCGCT CTACATCCTC
AACCAGAAGC GGGCGCATCT CTTCGATCTC GAGCAGCGCT TCTCGGTCAC GATCACCATT
TCCGCCGACG ACCGGCTCGT GGCGACCTCC GCCTTCCAGC TCGAACGCGG TGAGCCGGCG
GTGAAGCACG AGGGCCCGGT GACGGGCGTG CGCGCCGTGG CGATCTCGCC GGTCTACGAG
GCCGAGGAGT TCGAGGACGA GGCGGTCGAG AGCCAGGAGA CCGAAGAGGT CGAGACCGAG
GTCGAAGCGG AGGCCGAGGG CGCGTCCGAG GAGCGCCCGG CCGCCGACGC GTCCGAGGAG
GGCGGTGGCC GTCGCCGCCG TCGCCGTCGC CGTCGCGGTG GTCGCACCGC CGGTGAGGGC
GAGGCCCGCG CGCGGGACGA GGACGGGACC GACAGCGAGG ACGGGGCCGA GGACGGCGCG
GAGGACGGCG ACGATGCGCC CGATTCCGAG CCGGAGGCCG CCGAGGCGGC TCTCGGCGCC
GCGGCCGACC CGGACGAGAC CGCATCGGAC GCCGACGCCA ACGGCGAGGA CGCCAACGGA
CGCCGCCGTC GCCGCGGACG CCGGGGCGGT CGCGGCCGCG GCCGGACCGA GCGCAATGGC
CGTTCGGATT CCGAGCAGGA TGCCGATGCG GACGAGGCCG GCGCGGTGCG GGCCGCGGAG
GAGTCCGAGG CGCATCCCGA GGAGACCGCC TCCGATACCC TGCCGGTGGG CCCCGAGGAG
CCGTTCAACG ATGCCGATGT GAGCACCGTC TCGCTCGCCG CCGAGAACGG CGCCGCGGCC
GAGCCGCCGC CGGTCGTCCC CGCGCCGGAG CTCGAGCCGA TCCAGGTCGA GTCCTTTGCC
GAGGCCGCAA CCGAGGCGGC AGCGCCCAGC CCGGCCAACG CTGAGCCCGC GCCGGAGCCC
GTCGCGGTGG TGCTGACGCC GCCGGACCCG AACCGTCCCA AGCGGGCCGG CTGGTGGTCG
CGCACCAAGG CGGCGCTATC GGGGGAGTGA
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| Protein sequence | MANNKMLIDA MHPEETRVVT VQGSRVEEFD FEAANRRPLR GNIYLAKVTR VEPSLQAAFV
EYGGNRHGFL AFNEIHPDYY QIPMADRLAL IEAEAREEEE HREREERRPP RGRRSRGRRA
EARGSRPDDT VKSQEAVSDA GSEDAAIPGE GQAADAPAPE AIEAVRSALV EGRIEERNDE
RSESDAASAP VEAGGDASAS LPEAALEPPT SASEAPADEA AAVEPSDIAA ISEAPNPPVE
TTESSEAAPA EVDSAEAETV EPQPVAASAP VSQAEIEEAD ADSDEDSETD DSDDEDSEDD
ESDDEDEDDD SEDDDSDDED DDEESEDGEP RVAQVGGSGD ALAELPERPR AYRRHYKIQE
VIKRRQIILV QVVKEERGTK GAALTTYLSL AGRYSVLMPN TGRGGGISRK ITSAADRKRL
KEVVADLDVP DGMGIILRTA GASRTKPEIK RDFEYLMRLW ESVRELTLSS TAPALVYEEG
SLIKRAIRDL YNKDLDEVLV SGEDAYREAK DFMRMLMPGQ SKVVKPYRDP TPIFARYGVE
QQLDAMFSTH VALRSGGYLV INPTEALVSI DVNSGRATRE HDIEDTALKT NLEAAEEVAR
QVRLRDLAGL VVIDFIDMEE KRNNRAVEKR LNEALKNDRA RIQVGRISPF GLLEMSRQRI
RTGVLESSSI PCAHCGGSGF VRATSSVALH ILRSIEEVLL KSASHNVVLR TRTETALYIL
NQKRAHLFDL EQRFSVTITI SADDRLVATS AFQLERGEPA VKHEGPVTGV RAVAISPVYE
AEEFEDEAVE SQETEEVETE VEAEAEGASE ERPAADASEE GGGRRRRRRR RRGGRTAGEG
EARARDEDGT DSEDGAEDGA EDGDDAPDSE PEAAEAALGA AADPDETASD ADANGEDANG
RRRRRGRRGG RGRGRTERNG RSDSEQDADA DEAGAVRAAE ESEAHPEETA SDTLPVGPEE
PFNDADVSTV SLAAENGAAA EPPPVVPAPE LEPIQVESFA EAATEAAAPS PANAEPAPEP
VAVVLTPPDP NRPKRAGWWS RTKAALSGE
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