| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3639 |
|---|
| Symbol | ksgA |
|---|
| ID | 5834571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 4016382 |
|---|
| End bp | 4017272 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641369432 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_001641088 |
|---|
| Protein GI | 163853045 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.227832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG AAGCGTTGAG CACCGACGGC CTGCCGCCCC TGCGCGAGGT CGTGCGGCGG
CACGGGCTGG AGCCGAAGAA GGCGCTCGGC CAGAATTTCC TGTTTGACCT CAACCTGACC
GGCCGCATCG CCCGCTCGGC GGGGGCGCTC GAGGGCGTGA CGGTGGTGGA GGTCGGCCCC
GGCCCCGGCG GGCTGACGCG GGCGCTGCTG GCGGCGGGCG CCAAGCGCGT GGTGGCGATC
GAGCGCGATC CCCGCGCGCT GCCGGCTCTG GCCGAGATCG CCGCACACTA TCCCGGCCGG
CTCGACGTGA TCGATGCCGA CGCGGTCGGC TTCGATCCGC GCCCGCTGGT CGGCGACGGG
CCGGTGCGGA TCGTGGCGAA CCTGCCCTAC AACGTCGCCA CTGTGCTGCT CACCGGCTGG
CTCGGCGCGG ACACGCGCGA CGAGGCTTGG CCGCCGTGGT GGGAGTCGGC GACGCTGATG
TTCCAGCGCG AGGTCGCCGA GCGCATCGTT GCCGACGAGT CGGACCGGGC CAATTACGGC
CGGCTCGGCG TGCTGTGCGG CTGGCGCACG CAGGCGACCA TTCTGTTCGA CGTGGCGCCG
TCGGCCTTCG TGCCGCCGCC GAAGGTCACC TCCAGCGTCG TCCACCTGCG CCCGCGGCCC
GAGCCGCTGC CCTGCCGGAT CGCCGACCTC GAACGGGTGA CCCGCGCCGC CTTCGGCCAG
CGCCGCAAGA TGCTGCGCCA GAGCCTGAAG GCCGCCACCC CCGACCCCAT CCGCCTGCTC
ACCGCCGCCG GCCTACCGGA GACGGCGCGG GCGGAGGAGA TTCCGGTCGT CGGGTTCGTG
GCGATGGCGC GGGCACTGGA GGCGGGGGAA TCGCGCGAAA GCGGCCTGTA A
|
|---|
| Protein sequence | MSTEALSTDG LPPLREVVRR HGLEPKKALG QNFLFDLNLT GRIARSAGAL EGVTVVEVGP
GPGGLTRALL AAGAKRVVAI ERDPRALPAL AEIAAHYPGR LDVIDADAVG FDPRPLVGDG
PVRIVANLPY NVATVLLTGW LGADTRDEAW PPWWESATLM FQREVAERIV ADESDRANYG
RLGVLCGWRT QATILFDVAP SAFVPPPKVT SSVVHLRPRP EPLPCRIADL ERVTRAAFGQ
RRKMLRQSLK AATPDPIRLL TAAGLPETAR AEEIPVVGFV AMARALEAGE SRESGL
|
|---|
| |