| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3627 |
|---|
| Symbol | |
|---|
| ID | 5834159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 4006840 |
|---|
| End bp | 4007412 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641369420 |
|---|
| Product | beta-Ig-H3/fasciclin |
|---|
| Protein accession | YP_001641076 |
|---|
| Protein GI | 163853033 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.280773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGTA TCCGCAGTTC GGTTACCAAA TCGCTGACCC TGGGCGCTGC GCTCGCCCTC
AGCCTCGCCG CCGCGCCGAC GGCGGCGCTC GCCAAGAACC CGATGGTCGG CGGCGCGCCG
ATGTACGCCT CGAAGACCAT CGTCGAGAAC GCGGTGAACT CGAAGGACCA CACCACGCTG
GTGGCGGCGG TGAAGGCGGC GGGCCTCGTC GACACGCTCT CCGGCCCCGG CCCCTTCACC
GTCTTCGCGC CGACCGACGC CGCCTTCGCC AAGCTGCCGC CGGGCACGGT CGATTCCCTG
GTGCAGCCGC AGAACAAGGC GACGCTGACG GGGATCCTGA CCTACCACGT CGTGCCGGGC
ACCTACACGG CCAAGGATCT GATGGCTCTG GCCAAGCGGG GCGGCGGGGA AGCCAGCCTG
AAGACCGTCC AGGGCGAGCC GCTCACGGTG CAGGCCCGGG GCAAGAAGGT GTTCGTGACG
GACGCCAAGG GCAACACCGC CACCGTCACC ATCGCCAACG TGATGCAGTC GAACGGCGTG
ATCCACGTCA TCAACGGCGT GCTTCAGCCC TGA
|
|---|
| Protein sequence | MFRIRSSVTK SLTLGAALAL SLAAAPTAAL AKNPMVGGAP MYASKTIVEN AVNSKDHTTL
VAAVKAAGLV DTLSGPGPFT VFAPTDAAFA KLPPGTVDSL VQPQNKATLT GILTYHVVPG
TYTAKDLMAL AKRGGGEASL KTVQGEPLTV QARGKKVFVT DAKGNTATVT IANVMQSNGV
IHVINGVLQP
|
|---|
| |