Gene Mext_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3517 
Symbol 
ID5832368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3897842 
End bp3899278 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content68% 
IMG OID641369316 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001640973 
Protein GI163852930 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCT GCCCGTCTTC GCCCTTGAGG AACTCGCCGA GGTCAACGTG TGGGCGTGGT 
GCGCTTCACC ATCCGGTGGC ACGTCGCTCG CGCCGGCCAA GGTCGATGAG TGGCGCCGAG
GCGCGCTTAC GCGACCGAAT TGGCGGCGGA CGGGCCCTGG CCCTCATCGA TGGCAACAGC
TTCTACTGCT CGTGCGAGCG CGTGTTCGAC GCCAAGCTCG CCCGCGTGCC GGTGATCGTG
CTCTCGAACA ACGACGGCTG CGCGATCGCA CGGACGCCCG AGGCCAAGGC GCTCGGGATC
AAGATGGGCG ACCCCTACTT CAAGATCCGC GGTCTCTGCG AGCACCAAGG CGTGCGCGTG
TTCTCCTCGA ACTACACCCT CTACGGGGAT ATGTCGGCGC GCATCAACGC AATCTATCGC
GATGCTACGC CCGACGTGGA AATCTACTCG ATCGACGAGA GCTTCCTGGA CCTGACCGCC
TTCGTGCGCC GCGACCGGGT CGCCCTAGCT CGGGACATCC GCGCTACCGT GCGGGCCTGG
ACTGGCATCC CGACCTGCGT CGGCATCGGC CCAACCAAGA CGCTGGCCAA GCTCGCCAAC
CACATCGCCA AGACGGTGCC GGAACTCGAC GGCGTGTGCG ACCTAACCGA GCCGGCGGCT
TACGAGCACT GGCTCTGCCG CCTCCATGTT GGTGAGCTGT GGGGCGTCGG CCGCGCATCG
CTGCCGAAGC TGGAAGCGAT GGGCATCGAC ACGGTGGCGG ACCTGCGCGA CATCGATCCC
CGCCCAGTAC GCAAGGCGCT GACGGTCGTC GGCGAGCGCA TGATCCACGA GCTGCGCGGC
GTCTCCTGCC TTGGGCTCGA CCTCGTACCA GCCCGACGCA AGGGCTGCGC TGTGACGCGC
TCATTCTCCG GCCGGGTGAC AGAGCGAGCC GAGTTGGAGC AGGCGGTCGC GGCTCACGCG
ATCCGGCTGG GCGAGAAGCT GCGGCGGGAA GGCCTCGGTA CCGACCACAT CACCGTCTTC
TATCACACGA GCGAGCACGA CCGCGGTGAG CCAATGCGTT CAGTCTCGAC GGTGGTGACG
CTACCGGAGG CGACCAACGA CACGCTGGCG CTGATCCCGG CGGCGCTGCA TGGCATGGCG
CGCACCTGGC GTGAGCAGGG CAACCCGCCC TGGCGCTACT CGAAGGCAGG GGTGGTGACA
GTGGATCTTG TGCCGCTCGC TGCCTCGCAG CGGGCGTTGA TCGGTCGGCT CGACCGCGAG
CGTGCCGACC GCCTCATGGG TGCGCTGGAC GCCTGCAACG CCCGCTTCGG CCGCGGCAGC
GTCGTGCCAG CGCGGGCCGG ACTGGCGCAG CAGCGGCGGA CTTGGACGAC GAAGTTCGAG
ATGCGGACGC CGCGGTACAC GACACGGGCC GACGAGCTAC CCGTCGCGCA CGCTTGA
 
Protein sequence
MPSCPSSPLR NSPRSTCGRG ALHHPVARRS RRPRSMSGAE ARLRDRIGGG RALALIDGNS 
FYCSCERVFD AKLARVPVIV LSNNDGCAIA RTPEAKALGI KMGDPYFKIR GLCEHQGVRV
FSSNYTLYGD MSARINAIYR DATPDVEIYS IDESFLDLTA FVRRDRVALA RDIRATVRAW
TGIPTCVGIG PTKTLAKLAN HIAKTVPELD GVCDLTEPAA YEHWLCRLHV GELWGVGRAS
LPKLEAMGID TVADLRDIDP RPVRKALTVV GERMIHELRG VSCLGLDLVP ARRKGCAVTR
SFSGRVTERA ELEQAVAAHA IRLGEKLRRE GLGTDHITVF YHTSEHDRGE PMRSVSTVVT
LPEATNDTLA LIPAALHGMA RTWREQGNPP WRYSKAGVVT VDLVPLAASQ RALIGRLDRE
RADRLMGALD ACNARFGRGS VVPARAGLAQ QRRTWTTKFE MRTPRYTTRA DELPVAHA