Gene Mext_3493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3493 
Symbol 
ID5834982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3872878 
End bp3873921 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content70% 
IMG OID641369292 
Productinner-membrane translocator 
Protein accessionYP_001640949 
Protein GI163852906 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCTG CCCTCGCTGC CGCCCTCGCG CCCGTCCGGC GCCCCGCGCT GCCCGCTCTT 
CCCGTGCGCG CCGCCGGCCT CGCCCTACTG CTCGCGGTCG CCTTCGTGGC GATCCCGCTC
ACAGCCACCG ATTACTGGTA CAACGCGATC CTGATCCCGT TCCTGATCAT GGCTCTGGCC
GGGCTCGGCC TGAACCTGAC CATGGGCTAT GCGGGCCAAG CCTCGCTCGG CACCGGCGCC
TTCATGGCGG TGGGGGCCTA CGCCACCTAC AACCTGCTGC TGCGCCTGCC CGAACTGCCG
CTGCCGGTCA GCCTCGCGGG CGGGGGCCTC ATCGCCGGGG CGGTCGGGCT CGTCGTCGGC
CTGCCGAGCC TTCGCATCAA GGGCTTCTAC CTGATCGCGC CGACGCTGGC GGCGCAGTTC
CTGATCGAGT GGGTCTTCAA TCAGGTCGGC TGGTTCTCGA ACTACGCCTC GTCCAGCGCG
ATCTCGGCCC CACGCCTCGT GTTCCTCGGC TACGACCTGT CGAGCCCGGC CGGACGCTAC
GCCCTGACGC TGACCAGCGT CACCGTCGTC ACGGTGCTGG CGTGGCGCCT CGTCGGAAGC
CAGACCGGCC GCAACTGGCG GGCGGTGCGC GACGGCGAGA CCGCCGCGGC GGTGATCGGC
GTGCCGGTGG CGCGGGCCAA GCTCTCGGCC TTCTTCGTCG GGGCCGCGGT GAGCGGTGTG
GCCGGGGCGC TCTGGGCGTT TGCCTATCTC GGCACGGTCG ATGCCCGCAG CTTCGATCTC
GACCGCTCGT TCCAAGCGAT GTTCATCATC ATCATCGGCG GCTTGAGCAG CCTGTCGGGC
AGCTTCATCG GCGCCGCCTT CATCGTGCTG ACGCCGATCT TGCTCACCCA CCTGTCGAAC
GCGTTCCTCG GCGGCAGCCT CGACGGCGGC CAGCTCTCGA ACCTCCAACG CATCCTCTTC
GGCGCGCTCA TCATCGGGTT CCTGATCAAG GAGCCGAACG GGCTGGCCGC GCTGCTCGGC
CGCCTGCGCC GCCCCGCCCG CTGA
 
Protein sequence
MPPALAAALA PVRRPALPAL PVRAAGLALL LAVAFVAIPL TATDYWYNAI LIPFLIMALA 
GLGLNLTMGY AGQASLGTGA FMAVGAYATY NLLLRLPELP LPVSLAGGGL IAGAVGLVVG
LPSLRIKGFY LIAPTLAAQF LIEWVFNQVG WFSNYASSSA ISAPRLVFLG YDLSSPAGRY
ALTLTSVTVV TVLAWRLVGS QTGRNWRAVR DGETAAAVIG VPVARAKLSA FFVGAAVSGV
AGALWAFAYL GTVDARSFDL DRSFQAMFII IIGGLSSLSG SFIGAAFIVL TPILLTHLSN
AFLGGSLDGG QLSNLQRILF GALIIGFLIK EPNGLAALLG RLRRPAR