Gene Mext_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3480 
Symbol 
ID5835349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3860667 
End bp3861416 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID641369279 
Productcyclic nucleotide-binding 
Protein accessionYP_001640936 
Protein GI163852893 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCT TAGCGGGCAG TGGAACGGCG GCGAGCGGCC CCTTGCTGCG CAAGCTGCAG 
GGCTTCAGCA AGCTGGAAGA AGCGGACGCG GCCGCCCTGG CGATCATCGA GGCGGGGACA
CGGCTGATTC CGGCCGGCAC GGACCTGATC TCCGAGGGTG ACCGGCCCGA GGGCATGATC
GCGATCACGG AAGGCTTCGC CTGCCGCTAC AAGCTGCGGG CGAACGGTGC GCGTCAGATC
ACGGCCTACC TCATCCCGGG GGATATCTGC GACTTCGAGA CCTCGATCCT GAACCGGATC
GATCACACCA TCGGCACGCT TTCCACCTGC CGCGTCGCGC GGATCGGGCC CGAGGCCGGA
CGGGAATTGC GTCAACGTCC CGCACTCGCC CGCGGCCTGC GCACAGTGGC CCTCGTCGAC
GAGGCGACCC TTCGCGAGTG GATGATGAAT ATCGGCCGCC GCTCGGCCGT GGAGCGCCTC
GCGCACCTGT TGTGCGAATT GCTCGTACGC CTTCGGGCGG TGGGGCTTGC GAGCGGCAAC
AGCTTCGACC TGCCGATCAC GCAAATCGAC CTCGCCGACA CCACCGGCAT GACCAGCGTG
CACGTGAACC GCTCGCTCGG CGAACTCAAG CGCGCAGGGC TGATCGAGCG CAAGGGCAAG
CGCGTGACGC TCTGCGACCT GCCTCGCCTC GTCGAGCTGG CCGAGTTCCG GTCGAATTAC
CTGAATTGGG AAGCACAAAC CGCCGCCTAG
 
Protein sequence
MKVLAGSGTA ASGPLLRKLQ GFSKLEEADA AALAIIEAGT RLIPAGTDLI SEGDRPEGMI 
AITEGFACRY KLRANGARQI TAYLIPGDIC DFETSILNRI DHTIGTLSTC RVARIGPEAG
RELRQRPALA RGLRTVALVD EATLREWMMN IGRRSAVERL AHLLCELLVR LRAVGLASGN
SFDLPITQID LADTTGMTSV HVNRSLGELK RAGLIERKGK RVTLCDLPRL VELAEFRSNY
LNWEAQTAA