Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3366 |
Symbol | |
ID | 5835279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3729755 |
End bp | 3730948 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641369165 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001640823 |
Protein GI | 163852780 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.453868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGCGC CCAAGTATTT TCGCCACCTC TTTCTGGTCG CGCCACTGGC TTTCACGATT CCTGGCTCGG CGCTTGCCCA GCAGGAGCCC TGCATCGGCA ACTCTGCTGC CATCACCGGC CCGGCGGCCT TCACCGGCCA AGCCATCAGA ATGGGCGCCG AGATCGCCCT TGAGGAGATC AATGCCAAGG GCGGTGTGCT CGGCAAGCCG CTGCGCTTCG TCCAGTATGA CGACGCCGGA ACGCCGCCGC GCGGCGTCGA CAACACCCGG CGCGTCGCGC TGGCCGATAA GTGTGTCGTC ATCCTCGGCG GTTACCACTC TACCGTTTCG GTGGCTCAGG TTGAGCCGGT CCATGCCATC GGCATCCCGT TCGTCGGCGT GCTCGCAGCC AACACACAGG CCATCGAGAA CGGCCGTAAT CCGAACTACA TGTTCCGGGT ATCGGCCAAG GACAAATGGG TCGCCCGCTT CCTCGTCGAG CAGGCCGCGA AGGTCTCGAA AACCGGAAAG ATCGCCTTCT TCTATGAGAA TACAGGGTGG GGCAACGGAG CCGTGCCGGA TGTGAAGGCG GCGATCGCAA AGGCCGGAAA GGAACTGGTC GCCACGGAGA CCTTCAACTG GAACGATCAG GACATGACCG CGCAGGCGAT CCGCGCGCGG GATTCGGGTG CCGACGTTGC CCTGTTCTGG GCTCTCGACC GCGAGGGCAA CCAGCTCGTC CGCTCGATGG ACAAGGTCGG CTACAAGCCC ACCATCATCG GCGCCTGGGG CATCGCCGGC AATCTCGGCG AACTGGCCGG CCCGCTCGCC AATGGCGTCC AGGTCGTGCA GACCTACAGC TTCATGGGCG ACCTCGACCA TAAAGGCCAA GCGCTCTGGC AGAAGATCCA GACGAAGTAC GGCCTGAAGG ATCCATCGCA GATCAAGATG GGCTCCGGCA TCGCCAACAC CTACGACGCC GTGCACATCG TGGCCCAGGC CATCGAGAAG GCCGGTGCCT ACGATTGGAA GAAGGTCCGC GAGGCGCTTT ATCAAATCAG ATACGAGGGC TTAGTCGCGA AATACGATCC GGCCTTCGAT TCCTCTGACC CGGAACGCCA GGACGCAATT CTGCCGAGCG AATACAAGCT GACGGTCTGG TCCGACGGCA AGCTCCTGCC GATTGCGCAG ACCCCCTACG GCAGAACGAA CTGA
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Protein sequence | MVAPKYFRHL FLVAPLAFTI PGSALAQQEP CIGNSAAITG PAAFTGQAIR MGAEIALEEI NAKGGVLGKP LRFVQYDDAG TPPRGVDNTR RVALADKCVV ILGGYHSTVS VAQVEPVHAI GIPFVGVLAA NTQAIENGRN PNYMFRVSAK DKWVARFLVE QAAKVSKTGK IAFFYENTGW GNGAVPDVKA AIAKAGKELV ATETFNWNDQ DMTAQAIRAR DSGADVALFW ALDREGNQLV RSMDKVGYKP TIIGAWGIAG NLGELAGPLA NGVQVVQTYS FMGDLDHKGQ ALWQKIQTKY GLKDPSQIKM GSGIANTYDA VHIVAQAIEK AGAYDWKKVR EALYQIRYEG LVAKYDPAFD SSDPERQDAI LPSEYKLTVW SDGKLLPIAQ TPYGRTN
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