Gene Mext_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3366 
Symbol 
ID5835279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3729755 
End bp3730948 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content63% 
IMG OID641369165 
Productextracellular ligand-binding receptor 
Protein accessionYP_001640823 
Protein GI163852780 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.453868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCGC CCAAGTATTT TCGCCACCTC TTTCTGGTCG CGCCACTGGC TTTCACGATT 
CCTGGCTCGG CGCTTGCCCA GCAGGAGCCC TGCATCGGCA ACTCTGCTGC CATCACCGGC
CCGGCGGCCT TCACCGGCCA AGCCATCAGA ATGGGCGCCG AGATCGCCCT TGAGGAGATC
AATGCCAAGG GCGGTGTGCT CGGCAAGCCG CTGCGCTTCG TCCAGTATGA CGACGCCGGA
ACGCCGCCGC GCGGCGTCGA CAACACCCGG CGCGTCGCGC TGGCCGATAA GTGTGTCGTC
ATCCTCGGCG GTTACCACTC TACCGTTTCG GTGGCTCAGG TTGAGCCGGT CCATGCCATC
GGCATCCCGT TCGTCGGCGT GCTCGCAGCC AACACACAGG CCATCGAGAA CGGCCGTAAT
CCGAACTACA TGTTCCGGGT ATCGGCCAAG GACAAATGGG TCGCCCGCTT CCTCGTCGAG
CAGGCCGCGA AGGTCTCGAA AACCGGAAAG ATCGCCTTCT TCTATGAGAA TACAGGGTGG
GGCAACGGAG CCGTGCCGGA TGTGAAGGCG GCGATCGCAA AGGCCGGAAA GGAACTGGTC
GCCACGGAGA CCTTCAACTG GAACGATCAG GACATGACCG CGCAGGCGAT CCGCGCGCGG
GATTCGGGTG CCGACGTTGC CCTGTTCTGG GCTCTCGACC GCGAGGGCAA CCAGCTCGTC
CGCTCGATGG ACAAGGTCGG CTACAAGCCC ACCATCATCG GCGCCTGGGG CATCGCCGGC
AATCTCGGCG AACTGGCCGG CCCGCTCGCC AATGGCGTCC AGGTCGTGCA GACCTACAGC
TTCATGGGCG ACCTCGACCA TAAAGGCCAA GCGCTCTGGC AGAAGATCCA GACGAAGTAC
GGCCTGAAGG ATCCATCGCA GATCAAGATG GGCTCCGGCA TCGCCAACAC CTACGACGCC
GTGCACATCG TGGCCCAGGC CATCGAGAAG GCCGGTGCCT ACGATTGGAA GAAGGTCCGC
GAGGCGCTTT ATCAAATCAG ATACGAGGGC TTAGTCGCGA AATACGATCC GGCCTTCGAT
TCCTCTGACC CGGAACGCCA GGACGCAATT CTGCCGAGCG AATACAAGCT GACGGTCTGG
TCCGACGGCA AGCTCCTGCC GATTGCGCAG ACCCCCTACG GCAGAACGAA CTGA
 
Protein sequence
MVAPKYFRHL FLVAPLAFTI PGSALAQQEP CIGNSAAITG PAAFTGQAIR MGAEIALEEI 
NAKGGVLGKP LRFVQYDDAG TPPRGVDNTR RVALADKCVV ILGGYHSTVS VAQVEPVHAI
GIPFVGVLAA NTQAIENGRN PNYMFRVSAK DKWVARFLVE QAAKVSKTGK IAFFYENTGW
GNGAVPDVKA AIAKAGKELV ATETFNWNDQ DMTAQAIRAR DSGADVALFW ALDREGNQLV
RSMDKVGYKP TIIGAWGIAG NLGELAGPLA NGVQVVQTYS FMGDLDHKGQ ALWQKIQTKY
GLKDPSQIKM GSGIANTYDA VHIVAQAIEK AGAYDWKKVR EALYQIRYEG LVAKYDPAFD
SSDPERQDAI LPSEYKLTVW SDGKLLPIAQ TPYGRTN