Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3319 |
Symbol | |
ID | 5832286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3680728 |
End bp | 3681210 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641369119 |
Product | Holliday junction resolvase YqgF |
Protein accession | YP_001640777 |
Protein GI | 163852734 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.587532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.657687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCCT TCGCCGAAGC CTCGGCCGGC GCGCCGCGCC TGATCGGGCT CGACCTCGGC ACCAAGACCA TCGGGATCGC CCTGTCCGAT GTCGGCCGGC AGATCGCCTC GCCGCTGGAG ACGATCCGGC GGGTGAAGTT CACGCCCGAC GTGGCGCGGA TCGTGTCGCT GTGTGCGACG CACGCGGTCG GCGGCCTCGT GATCGGCCTG CCGCTCAACA TGGACGGTTC CGAAGGCCCC CGTGCCCAAT CGAGCCGGAG TTTTGCCCGC AACCTCAAGC CGCTCTTGCC GCTGCCGGTC CTGTTCTTCG ACGAGCGCCT CTCCACCGCC GCCGTCACCC GCACGCTGAT CGAAGCCGAC GCCTCGCGGG CGCGCCGCGG CGAACTCGTG GACAAGCTCG CCGCCGCCTA CATCCTGCAA AGCTGCCTCG ACGTGATGGG CGGGATGTTT TCCGGCGCGG CCGAGGAGGC GGACGGGTTT TAA
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Protein sequence | MAAFAEASAG APRLIGLDLG TKTIGIALSD VGRQIASPLE TIRRVKFTPD VARIVSLCAT HAVGGLVIGL PLNMDGSEGP RAQSSRSFAR NLKPLLPLPV LFFDERLSTA AVTRTLIEAD ASRARRGELV DKLAAAYILQ SCLDVMGGMF SGAAEEADGF
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