Gene Mext_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3319 
Symbol 
ID5832286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3680728 
End bp3681210 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content70% 
IMG OID641369119 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_001640777 
Protein GI163852734 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.587532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.657687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCT TCGCCGAAGC CTCGGCCGGC GCGCCGCGCC TGATCGGGCT CGACCTCGGC 
ACCAAGACCA TCGGGATCGC CCTGTCCGAT GTCGGCCGGC AGATCGCCTC GCCGCTGGAG
ACGATCCGGC GGGTGAAGTT CACGCCCGAC GTGGCGCGGA TCGTGTCGCT GTGTGCGACG
CACGCGGTCG GCGGCCTCGT GATCGGCCTG CCGCTCAACA TGGACGGTTC CGAAGGCCCC
CGTGCCCAAT CGAGCCGGAG TTTTGCCCGC AACCTCAAGC CGCTCTTGCC GCTGCCGGTC
CTGTTCTTCG ACGAGCGCCT CTCCACCGCC GCCGTCACCC GCACGCTGAT CGAAGCCGAC
GCCTCGCGGG CGCGCCGCGG CGAACTCGTG GACAAGCTCG CCGCCGCCTA CATCCTGCAA
AGCTGCCTCG ACGTGATGGG CGGGATGTTT TCCGGCGCGG CCGAGGAGGC GGACGGGTTT
TAA
 
Protein sequence
MAAFAEASAG APRLIGLDLG TKTIGIALSD VGRQIASPLE TIRRVKFTPD VARIVSLCAT 
HAVGGLVIGL PLNMDGSEGP RAQSSRSFAR NLKPLLPLPV LFFDERLSTA AVTRTLIEAD
ASRARRGELV DKLAAAYILQ SCLDVMGGMF SGAAEEADGF