Gene Mext_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3254 
Symbol 
ID5835356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3610587 
End bp3611999 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content69% 
IMG OID641369054 
Productthreonine synthase 
Protein accessionYP_001640712 
Protein GI163852669 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0242603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCACG TCTCGACCCG CGGCGCCGCT GCGCCCTTGA GCTTTTCCGA TGCGCTGCTC 
GCCGGCCTCG CCCGCGACGG CGGTCTCTAC GTGCCCGAGA GCTGGCCGCA GATTAGCCAT
GCGGAGATCG CGGGCTTCGC CGGCATGCGC TACGCCGAGG TCGCCAAGCG CGTGCTGCGT
CCGCTCATCG ACGGCGAGAT TCCGGACGAC GCGCTCGACG AGATGATCGA GGCGGCCTAC
GCCACCTTCC GCCATCCGGC GATCTGCCCG CTCACCCAGA TCGACGACAA CCTGTTCCTG
ATGGAGCTGT TTCACGGGCC GACGCTCGCG TTCAAGGACG TGGCGATGCA GCTCCTCGGG
CGGCTGATGG ATTACGTGCT GCGCCAGAAG GGCGGCCGCG CCACCATCGT CGGCGCCACC
TCGGGCGATA CGGGCAGTGC CGCGGTCGAG GCCTTCAAGG GGCTCGATCA GGTCGACGTG
TTCATCCTGT TTCCGCACGG CCGCGTCTCG GAGGTGCAGC GCCGGCAGAT GACCACGGTC
AACGCGCCGA ACGTCCACGC GCTCGCCATC GACGGCAATT TCGACGATTG CCAGAACATC
GTGAAGGCGA TGTTCCAGCA CGGCGACTTC GCCGACAGGG TGAAGCTCTC GGGCGTCAAC
TCGATCAATT GGGCGCGCGT CGCCGCGCAG ACCGTCTACT ACTTCACGAG CGCCGTGGCC
TTGGGCGCCC CGCACCGGAA GGTGTCGTTC GCGGTGCCGA CCGGCAATTT CGGCGACATT
CTCGCCGGCT GGGTCGCCAA GCGGATGGGC CTGCCGATCG AGCGGCTGAT GATCGGCACC
AACGCCAACG ACATCCTGGC CCGCACCCTG GAGCACGGGG CCTACGAGCC CCGCGGCGTG
CAGCCGACGA CCTCGCCCTC GATGGATATC CAGATCTCCT CGAACTTCGA GCGGCTGCTG
TTCGAGGCGT TGGGCCGCGA CGCCTCCGCG CTCGGCCGCC TGATGGCGGG TCTGAAGCAG
TCGGGCGGGT TCTCGCTGAG CCCCGAGGTG CTGGGCACCG TGCGCAACGA GTTCGATGCG
ACCGCCGTGC GCGAGCCCGA CGTCGTGGAA GAGATCGCGG GCACCTACCG CAAGACCGGC
CTCGTGCTCG ATCCGCACAG CGCCATCGGC GTGCGCGCCG GCCGCCGGCT GCTGGAGAAG
GATCCGGCCA CCCCGGTCGT GGCGCTGGCA ACCGCGCACC CCGCTAAATT CCCGGATGCG
GTCTCGCAAG CGACCGGCGG CGGGCGCCCG GTTCTGCCGC CCCACCTCGC CGAACTGATG
ACCCGGCCCG AGACGGTGGC GAACCTCGCC AACGATCAGG CCGCGATCGA GCGCTACATC
ACGGAACACG CCCGCATCAC CCGGGCCAAC TGA
 
Protein sequence
MLHVSTRGAA APLSFSDALL AGLARDGGLY VPESWPQISH AEIAGFAGMR YAEVAKRVLR 
PLIDGEIPDD ALDEMIEAAY ATFRHPAICP LTQIDDNLFL MELFHGPTLA FKDVAMQLLG
RLMDYVLRQK GGRATIVGAT SGDTGSAAVE AFKGLDQVDV FILFPHGRVS EVQRRQMTTV
NAPNVHALAI DGNFDDCQNI VKAMFQHGDF ADRVKLSGVN SINWARVAAQ TVYYFTSAVA
LGAPHRKVSF AVPTGNFGDI LAGWVAKRMG LPIERLMIGT NANDILARTL EHGAYEPRGV
QPTTSPSMDI QISSNFERLL FEALGRDASA LGRLMAGLKQ SGGFSLSPEV LGTVRNEFDA
TAVREPDVVE EIAGTYRKTG LVLDPHSAIG VRAGRRLLEK DPATPVVALA TAHPAKFPDA
VSQATGGGRP VLPPHLAELM TRPETVANLA NDQAAIERYI TEHARITRAN