Gene Mext_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3236 
Symbol 
ID5835434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3589264 
End bp3590322 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content70% 
IMG OID641369036 
Productputative mRNA 3-end processing factor 
Protein accessionYP_001640694 
Protein GI163852651 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.193513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAC GCGCCTCTGA TCTCCTCACC CTGACCCGCG AGGGCCTCTA TTGTCCGCTC 
GGGCGCTTCC ACGTCGATCC GACGCGGCCG GTCGAGCGGG CGCTGATCAC CCACGGCCAT
GCCGACCACG CTCGCGCCGG CCACGGCACG GTGCTGGCCA CGCCCGAGAC CCTGCGGATC
ATGGCCGTGC GCTACGGCGA GGATTTCTGC ACGACCCGCC AGGAAGCGCG GCTGGCTGAA
CGGATGCGGA TCGGCGACGT CACTGTGTTC TTCGCCCCCG CCGGCCACGT GCTCGGTTCG
GCGCAGATCG CGATCGAGCG CGACGGCAAA CGCATCGTCG TTTCGGGCGA CTACAAGCGC
GCCCCCGATC CGACCTGCCT GCCGTTCGAA GTGGTGCCCT GCGACGTGTT CATCACCGAG
GCCACCTTCG GCCTGCCGGT CTTCCGCCAT CCCGATACGC GGGGCGAGGT GCGCAAGCTG
ATCGACTCGG TGACACTGTT TCCCGAGCGT GCCCACATCG TCGGCGCCTA CGCGCTCGGC
AAGGCGCAGC GGGTGATGGC GCTGCTGCGC GAGGAGGGCT GGGACCGGCC GATCCATCTG
CACGGGGCGA TGGAGAAGCT GACCGAGCTC TACAAGCGGG AGGGCGTGCC GCTCGGCGAG
ACGCCGAAGG TGGTGGCCGC GGACCGGAAG TCCCTGCACG GCGCCATCGT GCTCTGCCCG
CCGTCCTCGA TTCAGGACGT ATGGTCGCGA AAATTCCCAG ATCCGGTCAC GGCCTTCGCC
TCGGGCTGGA TGCGGGTGCG CGCCCGCGCC CGGCAGAAGG GCGTCGAGCT GCCGCTCGTC
ATCTCCGACC ATTCCGACTG GCCGGACCTG TGCCGGACGA TTCTCGATAC GGGCGCTGAG
GAGGTCTGGG TGACGCATGG CCAGGAGGAC GCGCTGGTGC ATTGGTGCGG CACGCGCGGC
ATCCGCGCCA AGCCGCTGCA CCTCCTGGGC TACGGCGACG ACGGCGAGGC CGAGCCCGAT
CCGGGACACG ACCCGCGGAT GGAGGAGGCC TCGGCGTGA
 
Protein sequence
MSQRASDLLT LTREGLYCPL GRFHVDPTRP VERALITHGH ADHARAGHGT VLATPETLRI 
MAVRYGEDFC TTRQEARLAE RMRIGDVTVF FAPAGHVLGS AQIAIERDGK RIVVSGDYKR
APDPTCLPFE VVPCDVFITE ATFGLPVFRH PDTRGEVRKL IDSVTLFPER AHIVGAYALG
KAQRVMALLR EEGWDRPIHL HGAMEKLTEL YKREGVPLGE TPKVVAADRK SLHGAIVLCP
PSSIQDVWSR KFPDPVTAFA SGWMRVRARA RQKGVELPLV ISDHSDWPDL CRTILDTGAE
EVWVTHGQED ALVHWCGTRG IRAKPLHLLG YGDDGEAEPD PGHDPRMEEA SA