| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3065 |
|---|
| Symbol | |
|---|
| ID | 5835429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3411820 |
|---|
| End bp | 3412707 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641368865 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_001640525 |
|---|
| Protein GI | 163852482 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.686004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.910257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGAA CCGAAAAGGC TGCCCTGGCG AGCGCCGCCG TCGGCGTGCT CGTCACGGCG
CTGAAATTCA CCGCCTATTG GCTCACCGGC AGCCTCGCGC TCTATTCCGA CGCGCTGGAG
AGCATCATCA ACGTCGTGGC CGCGGCCTGC GCGTTCCTGG CCGTGCGCGT CGCCGCGCAG
CCGGCCGACG AGGATCACCC CTACGGCCAC CACAAGGCGG AGTATTTCTC CGCGGTGATC
GAGGGCGCGC TGGTCATCGT CGCCGCCCTG CTGATCCTGC GCGAGGCGTA TTTCGGCATC
CTCGATCCGA AGCCCCTCGA CGCGCCCGCG CTCGGTCTGG CCGTCAACGG CGTCGCCACC
ATCATCAACG CGGTCTGGGC GACGCTGCTG TTCCGGCGCG GCCGGCGGCT GCGCTCGCCC
GCCCTGTTGG CCGATGCCCG CCACATCCTC GCCGACGTGG TGACATCGGG CGGCGTGCTC
CTCGGCCTCG GCTTCGTCCT GGCCACGGGA ACGCCGGTGC TCGATCCGGT CGTGGCGGGC
TTGGTGGCCC TCAACATCCT CTGGTCCGGC TGGACGATGG TGCGCGATTC CGTCAACGGC
CTGATGGATC AGGCGGCCTC ACCCGAAATG GTCGCGCGCA TCCGCGCCCT GATCTCGGCT
CACAGCGAGG GCGCCCTGGA GGCCCACGAC GTGCGCACCC GCCATGCCGG CAGCGCCACC
TTCATCGACT TCCATCTCGT CGTGCCGGGC GAGATGACCG TGTTCGAATC CCACGCGATC
TGCGACCGTC TGGAGGGGGT GATCGAAGCG GGGATCGAGG GCGCGGTCGT GGTGATCCAT
GTCGAGCCGG GCGATCAGGC CAAGCTGCGC GGCGTGCCCG TGATTTGA
|
|---|
| Protein sequence | MTGTEKAALA SAAVGVLVTA LKFTAYWLTG SLALYSDALE SIINVVAAAC AFLAVRVAAQ
PADEDHPYGH HKAEYFSAVI EGALVIVAAL LILREAYFGI LDPKPLDAPA LGLAVNGVAT
IINAVWATLL FRRGRRLRSP ALLADARHIL ADVVTSGGVL LGLGFVLATG TPVLDPVVAG
LVALNILWSG WTMVRDSVNG LMDQAASPEM VARIRALISA HSEGALEAHD VRTRHAGSAT
FIDFHLVVPG EMTVFESHAI CDRLEGVIEA GIEGAVVVIH VEPGDQAKLR GVPVI
|
|---|
| |