| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3028 |
|---|
| Symbol | |
|---|
| ID | 5835464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 3374677 |
|---|
| End bp | 3375993 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641368828 |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_001640488 |
|---|
| Protein GI | 163852445 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.223709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG CGATGATTGG CTCGGGCTAT GTCGGCCTCG TGTCGGGCGC CTGCCTCGCC
GATTTCGGCC ACGAGGTCGT CTGCATCGAC AAGGATCCCG GCAAGATCGC CGCCCTCAAC
GAGGGCCGCA TGCCGATCTA CGAGCCCGGC CTCGACACCC TGGTCGCCGA GAACGTGCGC
GCCAAACGCC TCTCCTTCTC AACCGACCTC AAGCCCGCCG TGGCGCAGGC GCAAGCCGTG
TTCATCGCGG TGGGCACCCC GTCCCGCCGC GGCGACGGCT TTGCCGACCT GTCCTACGTC
TACGCCGCGG CCCGCGAGAT CGCCGAGGCG CTGACCGGCT ACACCGTGGT CGTCACCAAA
TCGACCGTCC CCGTCGGCAC CGGCGACGAG GTTGAGCGCA TCATTCGCGA GGCCCGCCCC
GACATCGATG TCGGCATCGC CTCGAACCCC GAATTCCTGC GCGAGGGCGC CGCCATCGGC
GATTTCAAGA GGCCCGACCG CATCGTCATC GGCGCCGAGG ACAACCGCGC CGCCGCCGTG
ATGCAGGAGG TCTACCGACC GCTCTACCTC AACCAGGCGC CGATCCTGTT CACCGGACGG
CGCACGGCCG AGCTGACCAA GTATGCCGCC AACGCGTTCC TGGCCACCAA GATCACCTTC
ATCAACGAGA TCGCGGATCT GTGCGAGCAG GTCGGGGCCA ACGTCCAGGA GGTCGCCCGC
GGCATCGGGC TCGACAACCG CATCGGTGGC AAGTTCCTGC ATGCGGGGCC GGGCTATGGC
GGCTCGTGCT TCCCCAAGGA TACGCTGGCG CTGGTGAAGA CGGCGCAGGA TTACGGCACG
CCGGTTCGGA TCGTCGAGAC GGTGGTGGCC GTCAACGATC AGAGGAAGCG CGCGATGGCG
CGCAAGGTGA TCGCGGCCTG CGGCGGGTCG GTGCGGGGCA AGCGGGTGGC GCTCCTGGGC
CTGACGTTCA AGCCGAACAC CGACGACATG CGCGACGCGC CCTCGCTGTC GATCATCGCC
GGCCTGCAGG ATGCGGGTGC ACAGATCGTG GCCTACGATC CCGAGGGGAT GGAGCAGGCG
CGACCGCTGC TTCACGGGGT CGCTTACGCC GAGGACGCCT ATGCCTGCGC CGAAGGCGCC
GACGCTCTGG TGATCGTGAC GGAGTGGAAC GCGTTCCGGG CGCTCGATCT CGCCCGGCTC
AAAGGGCTGA TGCGCGCCCC CGTCCTCGTC GATCTGCGCA ACGTCTACGC GCCGGAAGAG
GCCCGCCGCC AAGGTCTGCG CCATGTTGGC GTCGGTGCTC TGGCCCGCTA CGACTGA
|
|---|
| Protein sequence | MRIAMIGSGY VGLVSGACLA DFGHEVVCID KDPGKIAALN EGRMPIYEPG LDTLVAENVR
AKRLSFSTDL KPAVAQAQAV FIAVGTPSRR GDGFADLSYV YAAAREIAEA LTGYTVVVTK
STVPVGTGDE VERIIREARP DIDVGIASNP EFLREGAAIG DFKRPDRIVI GAEDNRAAAV
MQEVYRPLYL NQAPILFTGR RTAELTKYAA NAFLATKITF INEIADLCEQ VGANVQEVAR
GIGLDNRIGG KFLHAGPGYG GSCFPKDTLA LVKTAQDYGT PVRIVETVVA VNDQRKRAMA
RKVIAACGGS VRGKRVALLG LTFKPNTDDM RDAPSLSIIA GLQDAGAQIV AYDPEGMEQA
RPLLHGVAYA EDAYACAEGA DALVIVTEWN AFRALDLARL KGLMRAPVLV DLRNVYAPEE
ARRQGLRHVG VGALARYD
|
|---|
| |