Gene Mext_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_3006 
Symbol 
ID5835378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3353703 
End bp3354689 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content73% 
IMG OID641368806 
Producthypothetical protein 
Protein accessionYP_001640466 
Protein GI163852423 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.166518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCT CCCCCGCGCC CACGCCCCCT CGTTCGAGCC GGCGGATCGA TGCTCTCGAC 
CTCGCCCGCG GCGCGGCGCT CGCGGCGATG GCGGCCTATC ATGGGCTGTG GGATCTGGGC
TTCCTGCAGC TCACGCCGCA GAACTTCGCG CTGACCCCTG CGGGGCGGCT GGCGGCCCAC
GGCATCGCCG GGGCGTTCCT GCTGCTGGTG GGTGTCGGCC TCGTTCTCGC CAACGGCGAC
GGCGTGCGCT GGCGGCCCTT CGCCCTGCGG CTGGCGCGGA TCGGCGGGGC GGCGCTCCTC
ATCACCCTGG CGACCTGGAT CGCGTTTCCG CAGAGCTACA TCTTCTTCGG CATCCTGCAC
TGCATCGCCG TCTCGAGCGT GCTCGGCTTG CCCTTCGTGT TCCTGCCGGC CCCGGTCACG
GCGCTCGCGG CCGCCCTCGT GCTGGCGGCG CCGCACGTCG TGGTCCATCC CCTGCTCGAC
GCGCCGGAAC TCTACTTCCT CGGCCTCGGT CGGGGGCTGC CGGACACCAA CGATTGGGTG
CCGCTGTTTC CCTGGTTCGG GATGGTGCTG GCCGGGATCG CGCTCGCCCG GATCGCGCGG
CCGGCTTTGA CCGGGTCGTG GCTCGCCCGC TGGCAGGCCC GGAACGCCGT GGCGCGCGGG
GCGGCCTTTG CTGGGCGGCA CAGCCTCGCC GTCTATCTCG TTCACCAGCC GGCTTTGCTC
GCCCTGTTCA CCGGCCTCGT CACGCTGACC GGGCCGCATC CCAAGGCCGG GCTCGCGGGC
TTCCGCAAGG ATTACGTGGG CAATTGCACC CGCACCGGCG GCGAGGCGCA GGCCTGCCGG
ATCGCCGCCC GCTGCACGGC CGATGCCCTG CAGCGTGAGG GGCTCTGGGG CTCGGGCAAG
CCCTATTCCG CGGAGGAGCG GGCCAGGGCG CAGGGATTGT CACAGCTTTG CTACGAGGCC
GCGGAAGGCA CCGCGACCCC GCCGTGA
 
Protein sequence
MPASPAPTPP RSSRRIDALD LARGAALAAM AAYHGLWDLG FLQLTPQNFA LTPAGRLAAH 
GIAGAFLLLV GVGLVLANGD GVRWRPFALR LARIGGAALL ITLATWIAFP QSYIFFGILH
CIAVSSVLGL PFVFLPAPVT ALAAALVLAA PHVVVHPLLD APELYFLGLG RGLPDTNDWV
PLFPWFGMVL AGIALARIAR PALTGSWLAR WQARNAVARG AAFAGRHSLA VYLVHQPALL
ALFTGLVTLT GPHPKAGLAG FRKDYVGNCT RTGGEAQACR IAARCTADAL QREGLWGSGK
PYSAEERARA QGLSQLCYEA AEGTATPP