Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3006 |
Symbol | |
ID | 5835378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3353703 |
End bp | 3354689 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641368806 |
Product | hypothetical protein |
Protein accession | YP_001640466 |
Protein GI | 163852423 |
COG category | [S] Function unknown |
COG ID | [COG3503] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.166518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCCT CCCCCGCGCC CACGCCCCCT CGTTCGAGCC GGCGGATCGA TGCTCTCGAC CTCGCCCGCG GCGCGGCGCT CGCGGCGATG GCGGCCTATC ATGGGCTGTG GGATCTGGGC TTCCTGCAGC TCACGCCGCA GAACTTCGCG CTGACCCCTG CGGGGCGGCT GGCGGCCCAC GGCATCGCCG GGGCGTTCCT GCTGCTGGTG GGTGTCGGCC TCGTTCTCGC CAACGGCGAC GGCGTGCGCT GGCGGCCCTT CGCCCTGCGG CTGGCGCGGA TCGGCGGGGC GGCGCTCCTC ATCACCCTGG CGACCTGGAT CGCGTTTCCG CAGAGCTACA TCTTCTTCGG CATCCTGCAC TGCATCGCCG TCTCGAGCGT GCTCGGCTTG CCCTTCGTGT TCCTGCCGGC CCCGGTCACG GCGCTCGCGG CCGCCCTCGT GCTGGCGGCG CCGCACGTCG TGGTCCATCC CCTGCTCGAC GCGCCGGAAC TCTACTTCCT CGGCCTCGGT CGGGGGCTGC CGGACACCAA CGATTGGGTG CCGCTGTTTC CCTGGTTCGG GATGGTGCTG GCCGGGATCG CGCTCGCCCG GATCGCGCGG CCGGCTTTGA CCGGGTCGTG GCTCGCCCGC TGGCAGGCCC GGAACGCCGT GGCGCGCGGG GCGGCCTTTG CTGGGCGGCA CAGCCTCGCC GTCTATCTCG TTCACCAGCC GGCTTTGCTC GCCCTGTTCA CCGGCCTCGT CACGCTGACC GGGCCGCATC CCAAGGCCGG GCTCGCGGGC TTCCGCAAGG ATTACGTGGG CAATTGCACC CGCACCGGCG GCGAGGCGCA GGCCTGCCGG ATCGCCGCCC GCTGCACGGC CGATGCCCTG CAGCGTGAGG GGCTCTGGGG CTCGGGCAAG CCCTATTCCG CGGAGGAGCG GGCCAGGGCG CAGGGATTGT CACAGCTTTG CTACGAGGCC GCGGAAGGCA CCGCGACCCC GCCGTGA
|
Protein sequence | MPASPAPTPP RSSRRIDALD LARGAALAAM AAYHGLWDLG FLQLTPQNFA LTPAGRLAAH GIAGAFLLLV GVGLVLANGD GVRWRPFALR LARIGGAALL ITLATWIAFP QSYIFFGILH CIAVSSVLGL PFVFLPAPVT ALAAALVLAA PHVVVHPLLD APELYFLGLG RGLPDTNDWV PLFPWFGMVL AGIALARIAR PALTGSWLAR WQARNAVARG AAFAGRHSLA VYLVHQPALL ALFTGLVTLT GPHPKAGLAG FRKDYVGNCT RTGGEAQACR IAARCTADAL QREGLWGSGK PYSAEERARA QGLSQLCYEA AEGTATPP
|
| |