| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_2939 |
|---|
| Symbol | |
|---|
| ID | 5833271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 3283393 |
|---|
| End bp | 3284883 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641368739 |
|---|
| Product | inosine-5'-monophosphate dehydrogenase |
|---|
| Protein accession | YP_001640399 |
|---|
| Protein GI | 163852356 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
|---|
| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.27006 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTA TCAGCGCTGA CTCGATCATC GAGGGCCTGA CCTTCGACGA CGTGCTGCTG
CGCCCCGCCG CCTCTTCGGT GATGCCGGGC GAGGTCGATA TCGCCAGCCG CCTCACCCGC
ACGATCCGGC TCAACATGCC GATCATCGCC TCGGCGATGG ACACCGTGAC CGAGGCGCCG
ATGGCCATCG CCATGGCGCA GAACGGCGGT CTCGGCGTGA TCCACCGCAA TCTCGAGCCG
GCCGAGCAGG CCGAGCAGGT CCGCCTCGTC AAGAAGTACG AGTCGGGCAT GGTGCTCAAC
CCGATCACCA TCCACCCCGA CGAGACCCTC GCCGACGCCT TCGAGGTGAT GAAGCGGAAC
CGGATCTCCG GCATCCCGGT GGTCGAGCGC GGCCCCAACG GCTCGCGCGG CAAGCTCGTC
GGCATCCTGA CCAACCGCGA CGTGCGCTTC GCGACCAATG CCGGCCAGCC CGTGGCCGAG
CTCATGACCC GCGACCGGCT CATTACCGTG CGCGAGGGCG TGACGCAGGA CGAGGCCAAG
CGGCTGCTGC ACCAATTCCG CATCGAGAAG CTGCTCGTGG TCGATGACCA CTACCGCTGC
ATCGGCCTCA TCACCGTCAA GGACATCGAG AAGCAGGTCA CCTATCCCAA CGCCGTCAAG
GACGAGCAGG GCCGGTTGCG GGTCGCGGCG GCGACCACCA CGGGCGATGC CGGCTTCGAG
CGGGCCGAGC GCCTGATCGA TGCGGGCTGC GACGTGGTCG TGGTCGACAC CGCCCACGGC
CATTCCCGCA AGGTGCTCGA CAGCGTCGCC CGGGTGAAGC AGCTCTCCAA CGCCGTGCAG
ATCATCGCCG GCAACGTCGC CACCGCCGAG GGCGCCCGCG CCCTGATCGA TGCCGGTGCC
GACGCGATCA AGGTCGGCAT CGGACCGGGC TCGATCTGCA CCACCCGCAT CGTCGCCGGT
GTCGGCGTGC CCCAGCTCAC AGCGCTCATG GAAGCGGTCG AGGCGGCGCA CGGCGCCGAC
GTGCCGGTGA TCGCCGATGG CGGGATCAAG TTCTCGGGCG ATCTCGCCAA GGCGATCGCG
GCCGGCGCCT CGGTAGCGAT GCTGGGCTCG CTGCTGGCGG GCACCGACGA GGCGCCGGGC
GAGGTGTTCC TCTACCAGGG CCGCTCCTAC AAGAGCTACC GCGGGATGGG CTCGGTCGGC
GCGATGGCGC GGGGCTCGGC CGACCGCTAC TTCCAGGCCG AGGTCAACGA CACCCACAAG
CTCGTGCCCG AGGGGATCGA AGGTCAGGTG CCCTACAAGG GCCCGGTCGC GGCGGTGCTG
CACCAGCTCG CCGGGGGCCT GCGCGCGGCG ATGGGCTATG TCGGCGCCCC GACGGTGCCG
GAGTTTCAGG AGCGGGCGCA GTTCGTGCGC ATCACCAATG CCGGCCTGCG CGAGAGCCAC
GTCCACGACG TGACGATCAC CCGCGAGAGC CCGAACTATC CCAGCCGCTG A
|
|---|
| Protein sequence | MARISADSII EGLTFDDVLL RPAASSVMPG EVDIASRLTR TIRLNMPIIA SAMDTVTEAP
MAIAMAQNGG LGVIHRNLEP AEQAEQVRLV KKYESGMVLN PITIHPDETL ADAFEVMKRN
RISGIPVVER GPNGSRGKLV GILTNRDVRF ATNAGQPVAE LMTRDRLITV REGVTQDEAK
RLLHQFRIEK LLVVDDHYRC IGLITVKDIE KQVTYPNAVK DEQGRLRVAA ATTTGDAGFE
RAERLIDAGC DVVVVDTAHG HSRKVLDSVA RVKQLSNAVQ IIAGNVATAE GARALIDAGA
DAIKVGIGPG SICTTRIVAG VGVPQLTALM EAVEAAHGAD VPVIADGGIK FSGDLAKAIA
AGASVAMLGS LLAGTDEAPG EVFLYQGRSY KSYRGMGSVG AMARGSADRY FQAEVNDTHK
LVPEGIEGQV PYKGPVAAVL HQLAGGLRAA MGYVGAPTVP EFQERAQFVR ITNAGLRESH
VHDVTITRES PNYPSR
|
|---|
| |