Gene Mext_2924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_2924 
Symbol 
ID5831856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp3266935 
End bp3269265 
Gene Length2331 bp 
Protein Length776 aa 
Translation table11 
GC content70% 
IMG OID641368724 
ProductTonB-dependent receptor 
Protein accessionYP_001640384 
Protein GI163852341 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.753718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.115907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCCC ACTCCGCCGC GCGCCGTGCC GCCTGGCTCC TCGCCGCTTC GCCGCTGGCC 
CTGTCGGGTT TGGCCGCGGC CCAGACCGCC GGCGAGTCCG TCACCCTGGA GGAACTTGCC
GTCACCGGCG AGGGCACGCC GCAAAGCCAA GCGGCGGCCG GGTCCGGTGC GCCGGGCTTC
GGGGTCTCGG GCCCGCCGGG CGCGGCCGCC CTCGGCATCG AGCGCCCGAC CGGGCAGGTC
GTCACTGCGG TCGGGCGCGA GGGGACGATC GCCAACCGCC CCGCCACCTC CATCGGCACG
GTGCTGCTCG ACAGCCCCGG CGTGACCCTG CGCCAGGGCA ATGGCGGGCG CGACGTGGTG
ATCTCGATCC GGGGCAACAA CGCCCGCGCC ACCGGCGTCA CCCGCAACAT GGTGGTGCTG
GAGGATGGCT TCCCCGTCAC CCAGCCCGAC GGCGCCTCGC GCTTCGATCT GGTCGATCCC
CGCGCCTATT CGCGCATCGA CGTGTTCCGC GGGCCGCAAT CGGCCCTGTT CGGCAATTTC
GCCACCGGCG GCGCCCTGGC CTTTCGCACC CGTACCGGCC GCGAGATCGA CGGCTACGAG
ATCGGCGTCG ATGCCGGGAG CTTCGGCTAC CTCAGCAACT ACTTCAGCGT CGGCGGCGTG
AGCGGTCCGT TCGAGATCAG CCTGTTTGCC AGCGACGTGC GCGCAAACGG CTACCAGGAC
CATTCCTCCT ACGACACCCA GACGATCAAT CTGCTCGCGA GCTACACGCC GAGCCCCGAC
AACCGCTTCA CCCTCAAGGT CATCAACAAC GAGGTCACGG CCAATATCCC CGCCCGGTCC
TCGCTCGACC AGTTCCGCAT CAACCCGTAC CAGCGCGGCT GCGAAGCGGC GGCGACGGCA
GCCCCCGGCT GCACCACCTT CGGCCTCCTG GCGAACGGCG CCTTCGGCCC GCGGGTGCCG
GTGACGGCGA GCGAAGGCGC GTTCCGCCGC AACGACCGGC GCACGATCAT CGCCGGGCGC
TGGGAGCACG ACATCGATGC GCAGACCGCG TGGCGGGTGC AGGTCGGCTT CGATGAGCGC
AACTACAACC AGCCGTTCTA CACGACCTCG GGACGCGGCA GCCTGCCCTC CTATTTCGTG
CAGACCGACC TGACCCGCCG CGGCGAGCTG TTCGGCCTGC CGGCCGTCGG CAGCGTGACG
CTCGCCTACA GCGCGGTCGA TATCGCGGCA TCCGTCTACA ACCGCGCGCC CTACGGCGGC
GCCCGCCTCG GCACGCTGAT CGGGTTGCAG GAGGCGCTGC AATCGAATCT CGGCGGCCGG
GCCCGGCTCG AACTCGAACT CGCGCCGCAA TGGACGGCCG TGGCCGGCCT CGGCGCGGAG
GAATCGAGCA TCATCGGGCG CAACCGCACC TTCGCGACGA CGGCCGCCGG CACCGGATCG
ACCCTGGCGC AGGCCGACCG CCGCTTCCTC AACGTCGCGC CGGAACTCGC CCTGGTCTAC
CGGCCGGATC CGGACTGGGC CCTGCGCGGC CGGGTGGCCA CCGGCTACGC GACGCCGTCC
TTTTCCAGCA TGTTCGTGAA CGCCACCGGC CTGCCCGGCA ACAACACCGA CCTGAAGACG
CAGGAGAATC TCGGCTTCGA TCTCGGCACC GATTTCATGC CCTTGCCGGG ACTGCGGCTC
AGCCTCACCG GCTTCTACGA GTTCTTCCAC AACGAGTTCG TCACGCAGTC GCCGGGGGCG
GGCCTGCTGA ACTACACCTT CAACGCGCCG GCTTCCGAGC ATCGCGGCAT CGAGGTGGGG
GCCGATTGGA CCTTCGCTCC GGGCTGGCGC GGGGTGTTGG CCTACACGTT CGACGATCAG
GTCTACACCG ACTACGTCGA GCAGCTCAGC GCCGCCGCGC TCACCGCCCG CTTCGACCGG
GCCGGCAACC GCATTCCCGG CGTACCGGCC CATCAGCTCC TCGCACGGAT CGGCTACGAC
GTGCCGGCCG GGGCCTTGGC CGGGCTCGGC GGCTTCGCCG AGGTGGTGGC GCAGGACGGC
TACTTCATCG ACAACGCCAA CTTCCTGAAG GTGCCGGGCT TCGCGATCCT GAACCTCAAC
ATCCACTACG CGGCCCTGCT GCCGAACGGC TATGCCCGGC GGATCGACCT GTATGGCGAG
GTCCGCAACG TCCTCGACAC GACCTATGTC GGCTCGGCCA ACCCGCTCGC GAACACGCTC
AACGCAGCAA CCGGCGCCCA GAGCGGCCGC GCCGCGCTCG CGAGCACGAC GGGCTCGATC
TTTGCCGGGC CCCCGCGCAC GTTCGTGGCG GGGATGAAGC TGTCGTTCTG A
 
Protein sequence
MRSHSAARRA AWLLAASPLA LSGLAAAQTA GESVTLEELA VTGEGTPQSQ AAAGSGAPGF 
GVSGPPGAAA LGIERPTGQV VTAVGREGTI ANRPATSIGT VLLDSPGVTL RQGNGGRDVV
ISIRGNNARA TGVTRNMVVL EDGFPVTQPD GASRFDLVDP RAYSRIDVFR GPQSALFGNF
ATGGALAFRT RTGREIDGYE IGVDAGSFGY LSNYFSVGGV SGPFEISLFA SDVRANGYQD
HSSYDTQTIN LLASYTPSPD NRFTLKVINN EVTANIPARS SLDQFRINPY QRGCEAAATA
APGCTTFGLL ANGAFGPRVP VTASEGAFRR NDRRTIIAGR WEHDIDAQTA WRVQVGFDER
NYNQPFYTTS GRGSLPSYFV QTDLTRRGEL FGLPAVGSVT LAYSAVDIAA SVYNRAPYGG
ARLGTLIGLQ EALQSNLGGR ARLELELAPQ WTAVAGLGAE ESSIIGRNRT FATTAAGTGS
TLAQADRRFL NVAPELALVY RPDPDWALRG RVATGYATPS FSSMFVNATG LPGNNTDLKT
QENLGFDLGT DFMPLPGLRL SLTGFYEFFH NEFVTQSPGA GLLNYTFNAP ASEHRGIEVG
ADWTFAPGWR GVLAYTFDDQ VYTDYVEQLS AAALTARFDR AGNRIPGVPA HQLLARIGYD
VPAGALAGLG GFAEVVAQDG YFIDNANFLK VPGFAILNLN IHYAALLPNG YARRIDLYGE
VRNVLDTTYV GSANPLANTL NAATGAQSGR AALASTTGSI FAGPPRTFVA GMKLSF