Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_2924 |
Symbol | |
ID | 5831856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3266935 |
End bp | 3269265 |
Gene Length | 2331 bp |
Protein Length | 776 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641368724 |
Product | TonB-dependent receptor |
Protein accession | YP_001640384 |
Protein GI | 163852341 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.753718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.115907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCCC ACTCCGCCGC GCGCCGTGCC GCCTGGCTCC TCGCCGCTTC GCCGCTGGCC CTGTCGGGTT TGGCCGCGGC CCAGACCGCC GGCGAGTCCG TCACCCTGGA GGAACTTGCC GTCACCGGCG AGGGCACGCC GCAAAGCCAA GCGGCGGCCG GGTCCGGTGC GCCGGGCTTC GGGGTCTCGG GCCCGCCGGG CGCGGCCGCC CTCGGCATCG AGCGCCCGAC CGGGCAGGTC GTCACTGCGG TCGGGCGCGA GGGGACGATC GCCAACCGCC CCGCCACCTC CATCGGCACG GTGCTGCTCG ACAGCCCCGG CGTGACCCTG CGCCAGGGCA ATGGCGGGCG CGACGTGGTG ATCTCGATCC GGGGCAACAA CGCCCGCGCC ACCGGCGTCA CCCGCAACAT GGTGGTGCTG GAGGATGGCT TCCCCGTCAC CCAGCCCGAC GGCGCCTCGC GCTTCGATCT GGTCGATCCC CGCGCCTATT CGCGCATCGA CGTGTTCCGC GGGCCGCAAT CGGCCCTGTT CGGCAATTTC GCCACCGGCG GCGCCCTGGC CTTTCGCACC CGTACCGGCC GCGAGATCGA CGGCTACGAG ATCGGCGTCG ATGCCGGGAG CTTCGGCTAC CTCAGCAACT ACTTCAGCGT CGGCGGCGTG AGCGGTCCGT TCGAGATCAG CCTGTTTGCC AGCGACGTGC GCGCAAACGG CTACCAGGAC CATTCCTCCT ACGACACCCA GACGATCAAT CTGCTCGCGA GCTACACGCC GAGCCCCGAC AACCGCTTCA CCCTCAAGGT CATCAACAAC GAGGTCACGG CCAATATCCC CGCCCGGTCC TCGCTCGACC AGTTCCGCAT CAACCCGTAC CAGCGCGGCT GCGAAGCGGC GGCGACGGCA GCCCCCGGCT GCACCACCTT CGGCCTCCTG GCGAACGGCG CCTTCGGCCC GCGGGTGCCG GTGACGGCGA GCGAAGGCGC GTTCCGCCGC AACGACCGGC GCACGATCAT CGCCGGGCGC TGGGAGCACG ACATCGATGC GCAGACCGCG TGGCGGGTGC AGGTCGGCTT CGATGAGCGC AACTACAACC AGCCGTTCTA CACGACCTCG GGACGCGGCA GCCTGCCCTC CTATTTCGTG CAGACCGACC TGACCCGCCG CGGCGAGCTG TTCGGCCTGC CGGCCGTCGG CAGCGTGACG CTCGCCTACA GCGCGGTCGA TATCGCGGCA TCCGTCTACA ACCGCGCGCC CTACGGCGGC GCCCGCCTCG GCACGCTGAT CGGGTTGCAG GAGGCGCTGC AATCGAATCT CGGCGGCCGG GCCCGGCTCG AACTCGAACT CGCGCCGCAA TGGACGGCCG TGGCCGGCCT CGGCGCGGAG GAATCGAGCA TCATCGGGCG CAACCGCACC TTCGCGACGA CGGCCGCCGG CACCGGATCG ACCCTGGCGC AGGCCGACCG CCGCTTCCTC AACGTCGCGC CGGAACTCGC CCTGGTCTAC CGGCCGGATC CGGACTGGGC CCTGCGCGGC CGGGTGGCCA CCGGCTACGC GACGCCGTCC TTTTCCAGCA TGTTCGTGAA CGCCACCGGC CTGCCCGGCA ACAACACCGA CCTGAAGACG CAGGAGAATC TCGGCTTCGA TCTCGGCACC GATTTCATGC CCTTGCCGGG ACTGCGGCTC AGCCTCACCG GCTTCTACGA GTTCTTCCAC AACGAGTTCG TCACGCAGTC GCCGGGGGCG GGCCTGCTGA ACTACACCTT CAACGCGCCG GCTTCCGAGC ATCGCGGCAT CGAGGTGGGG GCCGATTGGA CCTTCGCTCC GGGCTGGCGC GGGGTGTTGG CCTACACGTT CGACGATCAG GTCTACACCG ACTACGTCGA GCAGCTCAGC GCCGCCGCGC TCACCGCCCG CTTCGACCGG GCCGGCAACC GCATTCCCGG CGTACCGGCC CATCAGCTCC TCGCACGGAT CGGCTACGAC GTGCCGGCCG GGGCCTTGGC CGGGCTCGGC GGCTTCGCCG AGGTGGTGGC GCAGGACGGC TACTTCATCG ACAACGCCAA CTTCCTGAAG GTGCCGGGCT TCGCGATCCT GAACCTCAAC ATCCACTACG CGGCCCTGCT GCCGAACGGC TATGCCCGGC GGATCGACCT GTATGGCGAG GTCCGCAACG TCCTCGACAC GACCTATGTC GGCTCGGCCA ACCCGCTCGC GAACACGCTC AACGCAGCAA CCGGCGCCCA GAGCGGCCGC GCCGCGCTCG CGAGCACGAC GGGCTCGATC TTTGCCGGGC CCCCGCGCAC GTTCGTGGCG GGGATGAAGC TGTCGTTCTG A
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Protein sequence | MRSHSAARRA AWLLAASPLA LSGLAAAQTA GESVTLEELA VTGEGTPQSQ AAAGSGAPGF GVSGPPGAAA LGIERPTGQV VTAVGREGTI ANRPATSIGT VLLDSPGVTL RQGNGGRDVV ISIRGNNARA TGVTRNMVVL EDGFPVTQPD GASRFDLVDP RAYSRIDVFR GPQSALFGNF ATGGALAFRT RTGREIDGYE IGVDAGSFGY LSNYFSVGGV SGPFEISLFA SDVRANGYQD HSSYDTQTIN LLASYTPSPD NRFTLKVINN EVTANIPARS SLDQFRINPY QRGCEAAATA APGCTTFGLL ANGAFGPRVP VTASEGAFRR NDRRTIIAGR WEHDIDAQTA WRVQVGFDER NYNQPFYTTS GRGSLPSYFV QTDLTRRGEL FGLPAVGSVT LAYSAVDIAA SVYNRAPYGG ARLGTLIGLQ EALQSNLGGR ARLELELAPQ WTAVAGLGAE ESSIIGRNRT FATTAAGTGS TLAQADRRFL NVAPELALVY RPDPDWALRG RVATGYATPS FSSMFVNATG LPGNNTDLKT QENLGFDLGT DFMPLPGLRL SLTGFYEFFH NEFVTQSPGA GLLNYTFNAP ASEHRGIEVG ADWTFAPGWR GVLAYTFDDQ VYTDYVEQLS AAALTARFDR AGNRIPGVPA HQLLARIGYD VPAGALAGLG GFAEVVAQDG YFIDNANFLK VPGFAILNLN IHYAALLPNG YARRIDLYGE VRNVLDTTYV GSANPLANTL NAATGAQSGR AALASTTGSI FAGPPRTFVA GMKLSF
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